PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022769668.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 365aa MW: 41601.5 Da PI: 6.6763

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022769668.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.9	0.0007	4	26	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C ksF + L H+r+H XP_022769668.1 4 HKCKLCLKSFANGRALGGHMRSH 26 79********************9 PP
2	zf-C2H2	14.1	0.00014	235	257	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+F++ L H +H XP_022769668.1 235 YRCETCNKVFKSYQALGGHRASH 257 9************9999998887 PP
3	zf-C2H2	11.4	0.00099	288	310	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C ++Fs+ L H r+H XP_022769668.1 288 HECPVCFRVFSSGQALGGHKRSH 310 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MEKHKCKLCL KSFANGRALG GHMRSHMLNL PIPPKVEEKE RPKVAPKQLR EESEAASASA 60 SYLSSSSEEE GEEKGQFYGL RENPKRSIRL VDPEFVDAGS VVLQDRESET ESSKNPTRRR 120 SKRAWKILEH HQYHQQQQQR QEQQEDTKKL KVNTKQLCMT ESWAEPETVS SISDTTTEED 180 VAFCLMMLSR DQMKSKARQD EEEEETEIEK SMEETDESEE YFKLSKVNRT TRGKYRCETC 240 NKVFKSYQAL GGHRASHKKI KAHSPATHET ELEPENMGTC SMTEKKRHEC PVCFRVFSSG 300 QALGGHKRSH VTGQVVATTQ THDKSSKKLG DNLIDLNLPA PMDEDDVSQI ELSAVSDAEF 360 VNHIK

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MEKHKCKLCL KSFANGRALG GHMRSHMLNL PIPPKVEEKE RPKVAPKQLR EESEAASASA  60
SYLSSSSEEE GEEKGQFYGL RENPKRSIRL VDPEFVDAGS VVLQDRESET ESSKNPTRRR  120
SKRAWKILEH HQYHQQQQQR QEQQEDTKKL KVNTKQLCMT ESWAEPETVS SISDTTTEED  180
VAFCLMMLSR DQMKSKARQD EEEEETEIEK SMEETDESEE YFKLSKVNRT TRGKYRCETC  240
NKVFKSYQAL GGHRASHKKI KAHSPATHET ELEPENMGTC SMTEKKRHEC PVCFRVFSSG  300
QALGGHKRSH VTGQVVATTQ THDKSSKKLG DNLIDLNLPA PMDEDDVSQI ELSAVSDAEF  360
VNHIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	5e-66	C2H2 family protein