PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022769520.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 568aa MW: 61922.8 Da PI: 7.7262

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022769520.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	53.8	3.5e-17	263	312	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lr+l+P++ ++K +Ka+ L +++e+I+ Lq XP_022769520.1 263 RSKHSATEQRRRSKINDRFQMLRDLIPHS----DQKRDKASLLSEVIEHIQFLQ 312 889***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MELPQPQPFA AEGRKPTHDF LSLYSHSSVQ DPRPPSQGGY LKTHDFLQLE RLGKTSAKEE 60 TPVEVATAEK PPPPAPPPSV EHILPGGIGT YSISHISYFN PRVPKAEEAL FAVAQGSSSE 120 RNDENSNCSS YTGSGFTLWE ESAPKKGKTG KENTGETPVV REAAGKGEQW ATSSLERASQ 180 SSTNNHRNIF GSPSSSQPSS KQKSQSFMEI IKLAKGSAQD DDFKEDEGSV LKKESSTTTH 240 CKGELRVKVD GKSATDQTAN TPRSKHSATE QRRRSKINDR FQMLRDLIPH SDQKRDKASL 300 LSEVIEHIQF LQEKVHKYEG TDQGWNHEPS KLMPLRNDHG HTENYADQSI NGLSSAPALI 360 FSAKLDEENI TVTPTIPGTA RNPIESDMSS ATNFRAIDLR PGMTNKTIPF PMSLQTSFFT 420 SARSAGVAAQ LPPRLPSDAE NCASQPQSVQ CHTGSYTTNG ALPTEKLKEQ ELTIEDGTIS 480 MSSAYSQGLL NTLTQALQTS GVDLSHASIS VQIELGKRSS SWPIAPTSTL KDREAPSTNQ 540 ETVTRSRVGC GKNSDKPLKK LKARKQLS

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MELPQPQPFA AEGRKPTHDF LSLYSHSSVQ DPRPPSQGGY LKTHDFLQLE RLGKTSAKEE  60
TPVEVATAEK PPPPAPPPSV EHILPGGIGT YSISHISYFN PRVPKAEEAL FAVAQGSSSE  120
RNDENSNCSS YTGSGFTLWE ESAPKKGKTG KENTGETPVV REAAGKGEQW ATSSLERASQ  180
SSTNNHRNIF GSPSSSQPSS KQKSQSFMEI IKLAKGSAQD DDFKEDEGSV LKKESSTTTH  240
CKGELRVKVD GKSATDQTAN TPRSKHSATE QRRRSKINDR FQMLRDLIPH SDQKRDKASL  300
LSEVIEHIQF LQEKVHKYEG TDQGWNHEPS KLMPLRNDHG HTENYADQSI NGLSSAPALI  360
FSAKLDEENI TVTPTIPGTA RNPIESDMSS ATNFRAIDLR PGMTNKTIPF PMSLQTSFFT  420
SARSAGVAAQ LPPRLPSDAE NCASQPQSVQ CHTGSYTTNG ALPTEKLKEQ ELTIEDGTIS  480
MSSAYSQGLL NTLTQALQTS GVDLSHASIS VQIELGKRSS SWPIAPTSTL KDREAPSTNQ  540
ETVTRSRVGC GKNSDKPLKK LKARKQLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-111	bHLH family protein