PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022769503.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARR-B

Protein Properties

Length: 495aa MW: 55807.5 Da PI: 5.0018

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022769503.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	75.1	9.5e-24	222	275	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kp+l Wt+eLH+rF++a++ L G++ A Pk+il++m+v+gL ehv SHLQkYRl XP_022769503.1 222 KPKLIWTNELHNRFLQAMKVL-GIDGAHPKKILQHMNVPGLKKEHVSSHLQKYRL 275 79*****************.******************************8 PP
2	Myb_DNA-binding	36.1	1.5e-11	225	274	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 + WT e++ ++++a k lG + ++k+I ++m+ g+ +++ s++qky+ XP_022769503.1 225 LIWTNELHNRFLQAMKVLGIDgaHPKKILQHMNvPGLKKEHVSSHLQKYR 274 56***********************************************7 PP
3	Response_reg	51.6	5e-18	39	147	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vd + + + ++ ++l++ gy +v +a+ +++a ++++ + +Dl+l +p+md +ell++i++ + klp+++++ + + +l +l G XP_022769503.1 39 VLLVDGDSTCLTIISKMLRRFGY-KVMTAKRATDAFCIIRDGEykIDLVLAEGCLPDMDKYELLETIKKMS-KLPVVLMSVDYNGNAMLGCLFKG 131 89*******************.***********887777********************99.****99999****** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a+ +l+Kp+ +++l + XP_022769503.1 132 AMLYLVKPITMDDLKN 147 **********9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MAGPNHVVEP YLLQLLNKSD PYSLDLRSLQ YYLPLGVTVL LVDGDSTCLT IISKMLRRFG 60 YKVMTAKRAT DAFCIIRDGE YKIDLVLAEG CLPDMDKYEL LETIKKMSKL PVVLMSVDYN 120 GNAMLGCLFK GAMLYLVKPI TMDDLKNLWQ FAFIKGRENL LAVEEISGIE EESSLENASG 180 VNVESQPLIS EGRQNLQKVK RKRSDEMLND EDDNDDSTAP KKPKLIWTNE LHNRFLQAMK 240 VLGIDGAHPK KILQHMNVPG LKKEHVSSHL QKYRLSLKQE QDAIQKTMNS SSTFVNVASH 300 HVLSPFGLQE GFHQFSDMQS MRIADQPAIN GLIQENLNGC LTIPSPDSAY LLKHVDSNHY 360 DAPTTKFELK TQCIEQLDSA YPECNRTGDR VINNEGLVGF HQTGNSEQFL KAEIDLLNIG 420 DSWLESLLHC PTLFDGSLLE KQQSVLPEPL QLPPPQDQEV HDNFGAERGR ESDELFTTGK 480 GTSPLFHYDD FDGFW

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MAGPNHVVEP YLLQLLNKSD PYSLDLRSLQ YYLPLGVTVL LVDGDSTCLT IISKMLRRFG  60
YKVMTAKRAT DAFCIIRDGE YKIDLVLAEG CLPDMDKYEL LETIKKMSKL PVVLMSVDYN  120
GNAMLGCLFK GAMLYLVKPI TMDDLKNLWQ FAFIKGRENL LAVEEISGIE EESSLENASG  180
VNVESQPLIS EGRQNLQKVK RKRSDEMLND EDDNDDSTAP KKPKLIWTNE LHNRFLQAMK  240
VLGIDGAHPK KILQHMNVPG LKKEHVSSHL QKYRLSLKQE QDAIQKTMNS SSTFVNVASH  300
HVLSPFGLQE GFHQFSDMQS MRIADQPAIN GLIQENLNGC LTIPSPDSAY LLKHVDSNHY  360
DAPTTKFELK TQCIEQLDSA YPECNRTGDR VINNEGLVGF HQTGNSEQFL KAEIDLLNIG  420
DSWLESLLHC PTLFDGSLLE KQQSVLPEPL QLPPPQDQEV HDNFGAERGR ESDELFTTGK  480
GTSPLFHYDD FDGFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-45	ARR-B family protein