PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022769463.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 1080aa MW: 119752 Da PI: 8.2427

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022769463.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.7	5.3e-41	151	228	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C++dls+ak+yhrrhkvCe+hska+++lv +++qrfCqqCsrfh lsefD++krsCrrrLa+hn+rrrk+q+ XP_022769463.1 151 MCQVDNCKEDLSNAKDYHRRHKVCEIHSKATKALVGKQMQRFCQQCSRFHPLSEFDDGKRSCRRRLAGHNRRRRKTQP 228 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1080 aa Download sequence
MEEVGAQVAP AIFIHQALAS RFCEPPSLPR KRDLSYQTPS FQYQNPSQQR LANPTDNWNP 60 KLWEWDTVRF IAKPLDTQTL LPGTATAEQI KKDLVNGNEN SIMSKKTTVV NVDDEGLQLN 120 LAGGLNSVAE PVSRPNKKVR SGSPGSTNYP MCQVDNCKED LSNAKDYHRR HKVCEIHSKA 180 TKALVGKQMQ RFCQQCSRFH PLSEFDDGKR SCRRRLAGHN RRRRKTQPED LTSRLLLPVN 240 RDNAGNGNLD IVNLLTALAR TQGKNEDKSI NYSSVTNRDQ LIQILSKINS LHLPMDLAAK 300 LPNVGVLNRK NQDQPLVGQQ NQLNEKKTSS PSTVDLLAAL SATLTSSSSD AFAILSQRSS 360 QNSDSEKTKS TCPDNVAAPR TRNRAPLEFT SVGGESSTSY QSPVEDSECQ IQETRAHLPL 420 QLFSSSPEDD SPPKLASSGK YFSSDSSNPM EERSPSSSPI VQKLFPMHST AEAVKYEKMQ 480 IGRDTNINAE GSRTHVSILP LELFSGSKKE TGHSSFQHFP SQAGYTSSGS DHSPSSLNSD 540 AQDRTGRIIF KLFDKDPSHF PGTLRTQIYN WLSNSPSEME SYIRPGCVVL SLYVSMSSVA 600 WEQLEGNLLQ YVNCLLQDSD SDFWRKARFL VYTGRQFASH KDGKIRLCKS WRSWSSPELI 660 SVSPLAIVGG QESSLLVRGR NLTNPGTQIR CAYMGGYSSM QISGSAYQGS PYDEVNMVGG 720 FKIHASSTSA LGRCFIEVEN GFKGNSFPII IADATICKEL RLLESEFDIE AKASSIISEE 780 HAYDSRHPRS MEEVLHFLNE LGWLFQRRST CPLPKSSDYS LCRFKFLLIF SVERDYCALV 840 KVLLDILVES NLDMDGLSRE SLAMLSEIQL LCRAVKRRCR KMADLLIHYS VSSSDGNSKK 900 YIFPPNLEGA GGITPLHLAA CTSSSEHMVD ALTNDPQEIG LSCWNSLLDA NGQSPYTYAM 960 MRNNHTYNKL VAGKFADRRN GQVSVRIGIE DELLGLTAVN LHEIGSQFKQ GRSSCAKCAV 1020 VAAKFNKRFP SSQGLLQRPY VHSMLAIAAV CVCVCLFLRG LPDIGSVAPF KWENLDFGTI

Sequence ? help Back to Top

Protein Sequence Length: 1080 aa Download sequence

MEEVGAQVAP AIFIHQALAS RFCEPPSLPR KRDLSYQTPS FQYQNPSQQR LANPTDNWNP  60
KLWEWDTVRF IAKPLDTQTL LPGTATAEQI KKDLVNGNEN SIMSKKTTVV NVDDEGLQLN  120
LAGGLNSVAE PVSRPNKKVR SGSPGSTNYP MCQVDNCKED LSNAKDYHRR HKVCEIHSKA  180
TKALVGKQMQ RFCQQCSRFH PLSEFDDGKR SCRRRLAGHN RRRRKTQPED LTSRLLLPVN  240
RDNAGNGNLD IVNLLTALAR TQGKNEDKSI NYSSVTNRDQ LIQILSKINS LHLPMDLAAK  300
LPNVGVLNRK NQDQPLVGQQ NQLNEKKTSS PSTVDLLAAL SATLTSSSSD AFAILSQRSS  360
QNSDSEKTKS TCPDNVAAPR TRNRAPLEFT SVGGESSTSY QSPVEDSECQ IQETRAHLPL  420
QLFSSSPEDD SPPKLASSGK YFSSDSSNPM EERSPSSSPI VQKLFPMHST AEAVKYEKMQ  480
IGRDTNINAE GSRTHVSILP LELFSGSKKE TGHSSFQHFP SQAGYTSSGS DHSPSSLNSD  540
AQDRTGRIIF KLFDKDPSHF PGTLRTQIYN WLSNSPSEME SYIRPGCVVL SLYVSMSSVA  600
WEQLEGNLLQ YVNCLLQDSD SDFWRKARFL VYTGRQFASH KDGKIRLCKS WRSWSSPELI  660
SVSPLAIVGG QESSLLVRGR NLTNPGTQIR CAYMGGYSSM QISGSAYQGS PYDEVNMVGG  720
FKIHASSTSA LGRCFIEVEN GFKGNSFPII IADATICKEL RLLESEFDIE AKASSIISEE  780
HAYDSRHPRS MEEVLHFLNE LGWLFQRRST CPLPKSSDYS LCRFKFLLIF SVERDYCALV  840
KVLLDILVES NLDMDGLSRE SLAMLSEIQL LCRAVKRRCR KMADLLIHYS VSSSDGNSKK  900
YIFPPNLEGA GGITPLHLAA CTSSSEHMVD ALTNDPQEIG LSCWNSLLDA NGQSPYTYAM  960
MRNNHTYNKL VAGKFADRRN GQVSVRIGIE DELLGLTAVN LHEIGSQFKQ GRSSCAKCAV  1020
VAAKFNKRFP SSQGLLQRPY VHSMLAIAAV CVCVCLFLRG LPDIGSVAPF KWENLDFGTI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	873	878	RAVKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	0.0	SBP family protein