PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022768920.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 496aa MW: 51917.3 Da PI: 9.5958

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022768920.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	70	92	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022768920.1 70 FVCEICNKGFQRDQNLQLHRRGH 92 89*******************88 PP
2	zf-C2H2	15.8	4.1e-05	146	168	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+k + +s+ k H++t+ XP_022768920.1 146 WKCERCSKKYAVQSDWKAHMKTC 168 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MVELENSSTM TISTASGEAS ASSSVNQIQG TQPKGGGGPP KKKRNLPGMP DPDAEVIALS 60 PKSLLATNRF VCEICNKGFQ RDQNLQLHRR GHNLPWKLRQ RTSKEIRKRV YVCPEPSCVH 120 HNPARALGDL TGIKKHFCRK HGEKKWKCER CSKKYAVQSD WKAHMKTCGT REYKCDCGTI 180 FSRRDSFMTH RAFCDALAEE SARANRLVNA ITEGNVNVNG NGNGNENGKS MVGGEATAAT 240 SPPPQPLTPS TTSVVSPEIP ENPMELSPPT PAATKASTSN SNVFASIFAP NSQPSKIQAP 300 ASIRQSAAPL ERTSLSLSSP LYLSNNGPSI FTGTEHDHCH YAPSPQPAMS ATALLQKAAQ 360 MGAAASNPSL LRGLGLAVSA TSSAGQDPNV KSESNSMTAG LGLGLPSNGN SGLTNPMIGS 420 SSLFGNRPTT LDLLGLGIGI GDGGASSSGL SALLTSFGGG FNVGEAATTS YGAGGRSPRE 480 TWGGAPERKP NGPAIL

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MVELENSSTM TISTASGEAS ASSSVNQIQG TQPKGGGGPP KKKRNLPGMP DPDAEVIALS  60
PKSLLATNRF VCEICNKGFQ RDQNLQLHRR GHNLPWKLRQ RTSKEIRKRV YVCPEPSCVH  120
HNPARALGDL TGIKKHFCRK HGEKKWKCER CSKKYAVQSD WKAHMKTCGT REYKCDCGTI  180
FSRRDSFMTH RAFCDALAEE SARANRLVNA ITEGNVNVNG NGNGNENGKS MVGGEATAAT  240
SPPPQPLTPS TTSVVSPEIP ENPMELSPPT PAATKASTSN SNVFASIFAP NSQPSKIQAP  300
ASIRQSAAPL ERTSLSLSSP LYLSNNGPSI FTGTEHDHCH YAPSPQPAMS ATALLQKAAQ  360
MGAAASNPSL LRGLGLAVSA TSSAGQDPNV KSESNSMTAG LGLGLPSNGN SGLTNPMIGS  420
SSLFGNRPTT LDLLGLGIGI GDGGASSSGL SALLTSFGGG FNVGEAATTS YGAGGRSPRE  480
TWGGAPERKP NGPAIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-124	C2H2 family protein