PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022768919.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 502aa MW: 52451.9 Da PI: 9.4657

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022768919.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	70	92	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022768919.1 70 FVCEICNKGFQRDQNLQLHRRGH 92 89*******************88 PP
2	zf-C2H2	15.7	4.1e-05	146	168	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+k + +s+ k H++t+ XP_022768919.1 146 WKCERCSKKYAVQSDWKAHMKTC 168 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MVELENSSTM TISTASGEAS ASSSVNQIQG TQPKGGGGPP KKKRNLPGMP DPDAEVIALS 60 PKSLLATNRF VCEICNKGFQ RDQNLQLHRR GHNLPWKLRQ RTSKEIRKRV YVCPEPSCVH 120 HNPARALGDL TGIKKHFCRK HGEKKWKCER CSKKYAVQSD WKAHMKTCGT REYKCDCGTI 180 FSRDSFMTHR AFCDALAEES ARANRLVNAI TEGNVNVNGN GNGNENGKSM VGGEATAATS 240 PPPQPLTPST TSVVSPGMSI QSSEIPENPM ELSPPTPAAT KASTSNSNVF ASIFAPNSQP 300 SKIQAPASIR QSAAPLERTS LSLSSPLYLS NNGPSIFTGT EHDHCHYAPS PQPAMSATAL 360 LQKAAQMGAA ASNPSLLRGL GLAVSATSSA GQDPNVKSES NSMTAGLGLG LPSNGNSGLT 420 NPMIGSSSLF GNRPTTLDLL GLGIGIGDGG ASSSGLSALL TSFGGGFNVG EAATTSYGAG 480 GRSPRETWGG APERKPNGPA IL

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MVELENSSTM TISTASGEAS ASSSVNQIQG TQPKGGGGPP KKKRNLPGMP DPDAEVIALS  60
PKSLLATNRF VCEICNKGFQ RDQNLQLHRR GHNLPWKLRQ RTSKEIRKRV YVCPEPSCVH  120
HNPARALGDL TGIKKHFCRK HGEKKWKCER CSKKYAVQSD WKAHMKTCGT REYKCDCGTI  180
FSRDSFMTHR AFCDALAEES ARANRLVNAI TEGNVNVNGN GNGNENGKSM VGGEATAATS  240
PPPQPLTPST TSVVSPGMSI QSSEIPENPM ELSPPTPAAT KASTSNSNVF ASIFAPNSQP  300
SKIQAPASIR QSAAPLERTS LSLSSPLYLS NNGPSIFTGT EHDHCHYAPS PQPAMSATAL  360
LQKAAQMGAA ASNPSLLRGL GLAVSATSSA GQDPNVKSES NSMTAGLGLG LPSNGNSGLT  420
NPMIGSSSLF GNRPTTLDLL GLGIGIGDGG ASSSGLSALL TSFGGGFNVG EAATTSYGAG  480
GRSPRETWGG APERKPNGPA IL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-123	C2H2 family protein