PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022768918.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 503aa MW: 52608.1 Da PI: 9.5958 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.2 | 1.4e-05 | 70 | 92 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022768918.1 70 FVCEICNKGFQRDQNLQLHRRGH 92 89*******************88 PP | |||||||
2 | zf-C2H2 | 15.7 | 4.1e-05 | 146 | 168 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+k + +s+ k H++t+ XP_022768918.1 146 WKCERCSKKYAVQSDWKAHMKTC 168 58*******************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 503 aa Download sequence |
MVELENSSTM TISTASGEAS ASSSVNQIQG TQPKGGGGPP KKKRNLPGMP DPDAEVIALS 60 PKSLLATNRF VCEICNKGFQ RDQNLQLHRR GHNLPWKLRQ RTSKEIRKRV YVCPEPSCVH 120 HNPARALGDL TGIKKHFCRK HGEKKWKCER CSKKYAVQSD WKAHMKTCGT REYKCDCGTI 180 FSRRDSFMTH RAFCDALAEE SARANRLVNA ITEGNVNVNG NGNGNENGKS MVGGEATAAT 240 SPPPQPLTPS TTSVVSPGMS IQSSEIPENP MELSPPTPAA TKASTSNSNV FASIFAPNSQ 300 PSKIQAPASI RQSAAPLERT SLSLSSPLYL SNNGPSIFTG TEHDHCHYAP SPQPAMSATA 360 LLQKAAQMGA AASNPSLLRG LGLAVSATSS AGQDPNVKSE SNSMTAGLGL GLPSNGNSGL 420 TNPMIGSSSL FGNRPTTLDL LGLGIGIGDG GASSSGLSAL LTSFGGGFNV GEAATTSYGA 480 GGRSPRETWG GAPERKPNGP AIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G50700.1 | 1e-125 | C2H2 family protein |