PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022768836.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | B3 | ||||||||
Protein Properties | Length: 453aa MW: 50720.9 Da PI: 8.0603 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 52.5 | 8.6e-17 | 12 | 99 | 4 | 99 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 v+ s++++ +rl +p f ++ +g s + l+ +sg W v+l +k + ++ +GW +Fv+++ L+ gDf+vF++dg+ f +vkvf++ XP_022768836.1 12 VF--SSTSSANRLKIPVGFKTNLEGR--ISGSVLLKGPSGYGWVVEL--VQKNDDLFFDEGWADFVRDHSLECGDFLVFRYDGDLVF--NVKVFDQ 99 45..8889999********8666766..5557***************..8888899*************************998777..9999997 PP | |||||||
2 | B3 | 53.1 | 5.6e-17 | 226 | 319 | 2 | 98 |
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 + ++++ +v+ s l +p +fa eh ++++++++l++++g W+v+ ++ +++l +GW +Fv++n++k+gD+++F++++ +fel+v+ XP_022768836.1 226 VRIMKRFNVSGSYTLNIPYQFAMEHL--PKCKTEIVLRNLKGACWTVNSVPtTRVHTSHTLCGGWLGFVRSNEIKVGDICIFEFVR--KFELCVH 316 56677778888899********9996..34889***************954566666799***********************876..9****** PP EE- CS B3 96 vfr 98 ++r XP_022768836.1 317 ILR 319 998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 453 aa Download sequence |
MLKSKRSHFL NVFSSTSSAN RLKIPVGFKT NLEGRISGSV LLKGPSGYGW VVELVQKNDD 60 LFFDEGWADF VRDHSLECGD FLVFRYDGDL VFNVKVFDQS LCEKEVAFHC KCSQGGSEFD 120 GIVGQKRDRE DGGVSLDQDC EGVLKRSRGS SSESDDNEYF GHEPMLATKT CEGLTSCDEN 180 HEGSILKTTV EDDDLNLHGS GCIPMVGEFE EKKVAQSFNS HFPFFVRIMK RFNVSGSYTL 240 NIPYQFAMEH LPKCKTEIVL RNLKGACWTV NSVPTTRVHT SHTLCGGWLG FVRSNEIKVG 300 DICIFEFVRK FELCVHILRV GKEDPDRQRG KAVPNVLIDR SDATISKKFV KNSSKVHSEP 360 KKVQMCDNKG SKMLDKWKYA ASFALCSLSR SGNDKQEAAI GGLRMMLALD EEKAARSFAS 420 GFPNFVRIMR KFNISGSYTL LSLQKHIRGL GIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 7e-20 | B3 family protein |