PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022768731.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | NAC | ||||||||
Protein Properties | Length: 280aa MW: 31450.6 Da PI: 5.6448 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 84.1 | 2.8e-26 | 30 | 165 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.....vikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 lppG+rF P+ e+l+++yL+ k ++ + ++ ike+++y+++P+dLp+ + ++ ++ ++F+ ++++ g+r r +k g+W + XP_022768731.1 30 LPPGCRFYPSKEQLLTHYLTGKNNSVAADRADlygygLIKELNLYDYKPSDLPEgacfVYGSQGRKRHWFCYTESR--GGSRMWRRAKGGFWCKI 122 79******************998887755444555557***************55776444566677777777665..588999999******** PP NAM 87 gkdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128 gk ++v++ ++ g+++ +vfy++ + +++++t W+m ey+l XP_022768731.1 123 GKVRDVVDGGNVPLGTRNKFVFYEAkSVKTAVRTPWIMYEYAL 165 ********99999**********872456678*********87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence |
MCNNQDSILP LIDIGLEGDS SRTRALCHNL PPGCRFYPSK EQLLTHYLTG KNNSVAADRA 60 DLYGYGLIKE LNLYDYKPSD LPEGACFVYG SQGRKRHWFC YTESRGGSRM WRRAKGGFWC 120 KIGKVRDVVD GGNVPLGTRN KFVFYEAKSV KTAVRTPWIM YEYALPHHLK ASFVLCRVFF 180 KCRVSENVLS SCAEESVSAL PHIDIQHDLR PDILESESNG DDFTKELADP IATRPVSLAS 240 FEFPSGNPPD TPNDLVGAQL TTNELLSIIE EDFIELEDLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02450.2 | 2e-20 | NAC family protein |