PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022768584.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TALE

Protein Properties

Length: 368aa MW: 42258.2 Da PI: 6.3837

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022768584.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.4e-09	295	330	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ XP_022768584.1 295 YKWPYPSETEKVALAESTGLDQKQINNWFINQRKRH 330 4679*****************************885 PP
2	ELK	37.9	3.8e-13	250	271	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrKYsgyL+sLkqE+s XP_022768584.1 250 ELKNHLLRKYSGYLSSLKQELS 271 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MEEYNQLNEN STPRGNFLYA SPVLAPNSSP YGRASSGSNV SNQQNQMPLT SFHLQSSECY 60 QSETHPIVKT EASTSQHGQK FHYPFLRGHQ AIHQQQEGNE STSEVEAIKA KIIAHPQYSN 120 LLEAYMDCQK VGAPPEVVAR LVAARQEFEA RQRSSVTSRD YSKDPELDQF MEAYYDMLVK 180 YRAELSRPIQ EALDFMRRIE AQLNMLSNGP VRIFNSDEKC EGVGSSEEDQ DNSGGETELP 240 EIDPRAEDRE LKNHLLRKYS GYLSSLKQEL SKKKKKGKLP KEARQKLLSW WELHYKWPYP 300 SETEKVALAE STGLDQKQIN NWFINQRKRH WKPSEDMQFM VMDGLHPQNA ALYMDGHYMG 360 DGPYRLGP

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MEEYNQLNEN STPRGNFLYA SPVLAPNSSP YGRASSGSNV SNQQNQMPLT SFHLQSSECY  60
QSETHPIVKT EASTSQHGQK FHYPFLRGHQ AIHQQQEGNE STSEVEAIKA KIIAHPQYSN  120
LLEAYMDCQK VGAPPEVVAR LVAARQEFEA RQRSSVTSRD YSKDPELDQF MEAYYDMLVK  180
YRAELSRPIQ EALDFMRRIE AQLNMLSNGP VRIFNSDEKC EGVGSSEEDQ DNSGGETELP  240
EIDPRAEDRE LKNHLLRKYS GYLSSLKQEL SKKKKKGKLP KEARQKLLSW WELHYKWPYP  300
SETEKVALAE STGLDQKQIN NWFINQRKRH WKPSEDMQFM VMDGLHPQNA ALYMDGHYMG  360
DGPYRLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-149	TALE family protein