PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022768478.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | GATA | ||||||||
Protein Properties | Length: 329aa MW: 35982 Da PI: 4.8647 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 50.2 | 3.4e-16 | 207 | 243 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+++ Tp +Rrgp g++tLCnaCGl+++ kg+ XP_022768478.1 207 CQHCGVSEnkTPAMRRGPAGPRTLCNACGLMWANKGT 243 *******999************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence |
MAAANPQPLQ ARPFEEHARG TIQIEDDDGD YEDDTMNDVE DANVNSVNVA EHGIGVIGGV 60 NGGGVVMASR TSELTLSFEG EVYVFPAVTP EKVQAVLLLL GGCDIPTGVP TIEVPFDQNN 120 GGVGDVSKRS NLSRRIASLV RFREKRKERC FDKKIRYTVR KEVAQRMHRK NGQFASLKES 180 TSTSSWDSSQ TGLQDGSPRP ETVVRKCQHC GVSENKTPAM RRGPAGPRTL CNACGLMWAN 240 KGTLRDLSKG GRNISMDQTE LETPIDVKPS IMEGDFSGNR DENFMQGNPS KDIMDGSNNA 300 SVNPNEEVDI YLHIEATYQD SAEQSSELK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 1e-64 | GATA family protein |