PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022768474.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 272aa    MW: 29586.2 Da    PI: 8.1618
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022768474.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA529.5e-17202237134
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C++Cg ++  Tp++Rrgp+g+++LCnaCGl+++ kg
  XP_022768474.1 202 CTHCGISSkaTPMMRRGPSGPRSLCNACGLFWANKG 237
                     *****9999************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MYGQFQPTNI PAQIAGSGVD DNVSASASAD NHHSIGYDVH ALDDGVGVED VSTDHIYVTA  60
AADSTSDLAV VHRVDSACQL TLSFRGQVYV FDAITPDKFH AVLLLLGGCE LTSGPHGVEI  120
SSRNLRGGVE FPRSNQPHRA ASLDRFRQKR KERCFDKKVR YIVRQEVALR MQRNKGQFTS  180
SKKSDGSYSW SQDDDNLPDT LCTHCGISSK ATPMMRRGPS GPRSLCNACG LFWANKGMGQ  240
IRTLLTVRGG INSVSDSWMG IGMVCQCGGD RK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.27e-67GATA family protein