PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022768073.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C3H

Protein Properties

Length: 1220aa MW: 134567 Da PI: 9.279

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022768073.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	18.3	4.2e-06	1071	1092	6	27
-SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 6 CrffartGtCkyGdrCkFaHgp 27 C++f +tG C+ G++Ck +H++ XP_022768073.1 1071 CPNFEATGSCPQGSKCKLHHPK 1092 *****************99985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1220 aa Download sequence
MDSTISTYSL DSNPVEATVS CIGWLDVGLQ HARDKVSILH RSSSNDTFPG VSASADEKSP 60 EKKGKISTSF PSVTAPVISR GVEVSDISKS SAQLPSNFTN DLLQLEQEVT DGLNTQEIEF 120 LCVNGSVAGP SQAVGSYSDA GRDDHPIIDP CSAFVESVAP SSTCLHLVKL GGDQLSTATP 180 VFAVNNHQID AMDIEGDHRG KVHVDTAEEQ KIISSEVTQC RVFPEDKSSR FDQRLPSTDV 240 EDDNPLPLKV DLPSASKSLV FGIDANEASA AYSNDAVMAA PDISYDLVSP CNRDNPVIST 300 STYKAHLNSE EKAYGDEKLS DDKPMIEGAC SSSVLVSYSQ QSKTILKSND AIQTNQSVAG 360 KAGLLPSHDS RNTNSPNFLS GETHGRRDQL SHVVPKSYPT RSSIVFSASK NSTSSTNITN 420 LQTWHRTNNS SAYPLSGNKH SLSANPLQRH IPKMAAHFRS TSYIRKGNSL VRKAVSVPAP 480 PQGSHSLSSS VYRLNSGVVD EVKKGAGPKS SADAVDLRTG RANSSLERPS TPPLFSVTKA 540 PKHTSNSSGE CTSSPLAEPS ISDCCETTTY HPSSMEINDV LNSPEDGLNT SETLNQNGSV 600 NNLEDWTEQN ENDLVPPNAK MVTCVKPKSN QLVATSDCYR TSILNADKNS FSASSDGYYK 660 KRKNQLIRTA LKSHIKQAVT MSDDESNSVV RMTAKVISSR TFGMRRSNKV VVKTNKPSKF 720 SLVWALHNAR LSNNDGNSQS HPKVLPQLFP WKRMTYKRSF KLNSVSSCCS SLSTIGRKML 780 LLRKRNTFYT RSTNGYSIRK SKVLSVGSSS LKWSKSIERH LRKANEEATL AIAEAERKKR 840 EQNGTLSGKG KRSHSCHKVV HGTEVQPGER IFRIGSVRYK MDSSRRSLQR ISDDESSCSA 900 GHLSERSTKK SYIPRRLVIG NDEYVRIGNG NKLVRDPKKW TRVLASEKVR WSLHTARLRL 960 VKKRKYCQFF TRFGKCNKDD GKCPYIHDPS KIAVCTKFLK GLCSNPNCKL THKVIPERMP 1020 DCSYFLRGLC TNESCPYRHV HVNPNASTCE GFLRGYCADG NECQKKHSYV CPNFEATGSC 1080 PQGSKCKLHH PKTRSKGKKS KRSMEHKNAR GRYFRIDISE PKRISERHQP LDDDNIFFDG 1140 KFSDYISLDV IDDDDNDDKA GELHRVISDQ TTFGDSDSSD LRLDDLDESI KPILIMNKIT 1200 ESLMVSKASS VKHVALQKRN

Sequence ? help Back to Top

Protein Sequence Length: 1220 aa Download sequence

MDSTISTYSL DSNPVEATVS CIGWLDVGLQ HARDKVSILH RSSSNDTFPG VSASADEKSP  60
EKKGKISTSF PSVTAPVISR GVEVSDISKS SAQLPSNFTN DLLQLEQEVT DGLNTQEIEF  120
LCVNGSVAGP SQAVGSYSDA GRDDHPIIDP CSAFVESVAP SSTCLHLVKL GGDQLSTATP  180
VFAVNNHQID AMDIEGDHRG KVHVDTAEEQ KIISSEVTQC RVFPEDKSSR FDQRLPSTDV  240
EDDNPLPLKV DLPSASKSLV FGIDANEASA AYSNDAVMAA PDISYDLVSP CNRDNPVIST  300
STYKAHLNSE EKAYGDEKLS DDKPMIEGAC SSSVLVSYSQ QSKTILKSND AIQTNQSVAG  360
KAGLLPSHDS RNTNSPNFLS GETHGRRDQL SHVVPKSYPT RSSIVFSASK NSTSSTNITN  420
LQTWHRTNNS SAYPLSGNKH SLSANPLQRH IPKMAAHFRS TSYIRKGNSL VRKAVSVPAP  480
PQGSHSLSSS VYRLNSGVVD EVKKGAGPKS SADAVDLRTG RANSSLERPS TPPLFSVTKA  540
PKHTSNSSGE CTSSPLAEPS ISDCCETTTY HPSSMEINDV LNSPEDGLNT SETLNQNGSV  600
NNLEDWTEQN ENDLVPPNAK MVTCVKPKSN QLVATSDCYR TSILNADKNS FSASSDGYYK  660
KRKNQLIRTA LKSHIKQAVT MSDDESNSVV RMTAKVISSR TFGMRRSNKV VVKTNKPSKF  720
SLVWALHNAR LSNNDGNSQS HPKVLPQLFP WKRMTYKRSF KLNSVSSCCS SLSTIGRKML  780
LLRKRNTFYT RSTNGYSIRK SKVLSVGSSS LKWSKSIERH LRKANEEATL AIAEAERKKR  840
EQNGTLSGKG KRSHSCHKVV HGTEVQPGER IFRIGSVRYK MDSSRRSLQR ISDDESSCSA  900
GHLSERSTKK SYIPRRLVIG NDEYVRIGNG NKLVRDPKKW TRVLASEKVR WSLHTARLRL  960
VKKRKYCQFF TRFGKCNKDD GKCPYIHDPS KIAVCTKFLK GLCSNPNCKL THKVIPERMP  1020
DCSYFLRGLC TNESCPYRHV HVNPNASTCE GFLRGYCADG NECQKKHSYV CPNFEATGSC  1080
PQGSKCKLHH PKTRSKGKKS KRSMEHKNAR GRYFRIDISE PKRISERHQP LDDDNIFFDG  1140
KFSDYISLDV IDDDDNDDKA GELHRVISDQ TTFGDSDSSD LRLDDLDESI KPILIMNKIT  1200
ESLMVSKASS VKHVALQKRN