PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022767559.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 750aa    MW: 85172.8 Da    PI: 6.37
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022767559.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS386.33.4e-1183777481374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+av+++d + a++lL+++++++sp gd +qRla++f+ +L+arla+++s++yk l +++ts    s+ l+a+ l++ ++P+ k+sh
  XP_022767559.1 377 LRTLLINCAQAVAADDRRTANELLKQIRQHSSPFGDGNQRLAHCFADGLEARLAGTGSQIYKGLVSKRTS---ASDILKAYLLYVAACPFRKISH 468
                     6789************************************************************999999...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     ++ N++I  a  ++ ++H+iDf+i +G+QWp+L++ L+ Rpegpp+lRiTg++ p++g   +e++eetg+rLa +Aee++vpf++n+ +ak++++
  XP_022767559.1 469 FISNKTINVASRKSMKLHVIDFGILYGFQWPTLIERLSLRPEGPPKLRITGIDFPQPGfrPAERVEETGRRLAAYAEEFKVPFQYNA-IAKKWDN 562
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++eeL ++++E ++Vn+ ++ ++llde+v+++s+r+ vL+l+++++P+++++   +  +n++ F++rf eal ++s++fd+le+ +pre+ er+
  XP_022767559.1 563 IQVEELGIDEEEFVVVNCLYRAKNLLDETVAVDSPRNIVLNLIRKINPNIFIHGIMNGAYNAPFFVTRFREALFHFSSMFDMLETIVPREDWERM 657
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +E+e+lgre+ n++ace  er+er et+++W++r  +aGF + p++  ++k+a   +r ++ + + ++e+s +l++gWk+r ++++SaW+
  XP_022767559.1 658 LIEKEILGREALNAIACESWERVERPETFKQWHARNLRAGFVQQPFERVIVKEATDRVRSFYHKDFVIDEDSRWLLQGWKGRIIYALSAWK 748
                     **************************************************************889*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 750 aa     Download sequence    
MDMDPRLRGF SDFQLRNQTV SAFQNQPVLV FPNQNFVAGS RFQNTYIDHK FREFHSDPAP  60
SNRAPISSLS HEEDTSEDCD FSDSVLRYIN HILMEEDMED KSCMLQESLD LQAAEKSFYD  120
VLGKKYPPSP EQNSTFVYKS GENPDDSFIG HYNSRISSSD NGINYFVDNG WMQNLGDFST  180
TQTQSFNVSS TSQSSYSSSI TSIDGLLESP NSTLLVPDLS GEIQSIWQFR KGVEEASKFI  240
PRSEDLFGNL EVYGVESQEC KAWTSGVLVK EEKNDEGEFS PTGSKGRKIS HRDNVETEEE  300
RSSKQAAISS ESTVRSEMFD MVLLCTSGKP PTHFTALRES LRNGTGKKVQ QNGPSKGPNG  360
GKGRGKRQNG KKEVVDLRTL LINCAQAVAA DDRRTANELL KQIRQHSSPF GDGNQRLAHC  420
FADGLEARLA GTGSQIYKGL VSKRTSASDI LKAYLLYVAA CPFRKISHFI SNKTINVASR  480
KSMKLHVIDF GILYGFQWPT LIERLSLRPE GPPKLRITGI DFPQPGFRPA ERVEETGRRL  540
AAYAEEFKVP FQYNAIAKKW DNIQVEELGI DEEEFVVVNC LYRAKNLLDE TVAVDSPRNI  600
VLNLIRKINP NIFIHGIMNG AYNAPFFVTR FREALFHFSS MFDMLETIVP REDWERMLIE  660
KEILGREALN AIACESWERV ERPETFKQWH ARNLRAGFVQ QPFERVIVKE ATDRVRSFYH  720
KDFVIDEDSR WLLQGWKGRI IYALSAWKPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein