PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022767179.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 299aa MW: 32552.2 Da PI: 4.3421 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.8 | 4.1e-05 | 272 | 295 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ Cg+sF + L++H + H XP_022767179.1 272 FPCKSCGRSFGSENALQSHSKAkH 295 89*****************88777 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence |
MEFWGAEVKS GQNFEVELED DGNRILHVSQ VALGEVIGDN KKEKGKETVC IYLKFKNEKF 60 VIGTLSQEKF PQIPLDLVLH DKFELSHTWK NGSVYFTGYY VDTSQDTESE EELPEPTTNP 120 IKPHATVSDP TTSKQVKIVE PKKDEDGSDD EDEDDSSDED EESGEDQEPG MQVNGENESD 180 DDTDSDEDDS EEESSDEDQE TPGKAGPSKK RSAESATKTP APEKKAKLVT PEKTDGKKVS 240 GHTATPHPSK QAGKATAAAA QMKQTPKLGG SFPCKSCGRS FGSENALQSH SKAKHGGAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03740.1 | 3e-28 | C2H2 family protein |