PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022767178.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 301aa MW: 32666.3 Da PI: 4.3421 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.7 | 4.1e-05 | 274 | 297 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ Cg+sF + L++H + H XP_022767178.1 274 FPCKSCGRSFGSENALQSHSKAkH 297 89*****************88777 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence |
MEFWGAEVKS GQNFEVELED DGNRILHVSQ VALGEVIGDN KKEKGKETVC IYLKFKNEKF 60 VIGTLSQEKF PQIPLDLVLH DKFELSHTWK NGSVYFTGYY VDTSQGGDTE SEEELPEPTT 120 NPIKPHATVS DPTTSKQVKI VEPKKDEDGS DDEDEDDSSD EDEESGEDQE PGMQVNGENE 180 SDDDTDSDED DSEEESSDED QETPGKAGPS KKRSAESATK TPAPEKKAKL VTPEKTDGKK 240 VSGHTATPHP SKQAGKATAA AAQMKQTPKL GGSFPCKSCG RSFGSENALQ SHSKAKHGGA 300 V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03740.1 | 3e-28 | C2H2 family protein |