PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022766804.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C3H

Protein Properties

Length: 272aa MW: 28484.4 Da PI: 9.9269

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022766804.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	28.5	2.6e-09	77	101	2	26
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 kt+lC++f+ Ck+Gd+C+FaHg XP_022766804.1 77 KTRLCNRFSSAEGCKFGDKCHFAHG 101 8***********************9 PP
2	zf-CCCH	38.4	2.1e-12	239	263	1	26
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 ykt+lC++fa+ G C +G+rC+FaHg XP_022766804.1 239 YKTKLCDNFAK-GSCTFGERCHFAHG 263 9********.***********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MDTRKRGRHE AGFNVNGGIK KSKPGCPFGE SCHFLHYVPG GYNAVAQIMN LSPAVPPASR 60 NMAASATIPN GSPSAVKTRL CNRFSSAEGC KFGDKCHFAH GDWELGKPIA PSHDDPRAMA 120 SIPGRMGSRM EPLPPSGPAA SFGASATAKI SVDASLAGAI IGKGGVHSKQ ICRRTGAKLS 180 IREHESDPTL RNIELEGSFE QIKQASAMVR ELITSLGPGP GPVKTPGVPG GQGHAGSNYK 240 TKLCDNFAKG SCTFGERCHF AHGAAELRKS VL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06770.1	9e-59	C3H family protein