PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022766742.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 352aa MW: 39152.9 Da PI: 6.2537

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022766742.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.4	1.2e-08	196	243	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN ++ L+el+P + +k a +L + +++++sLq XP_022766742.1 196 SHSLAERARREKINARMKLLQELVPGC----NKISGTALVLDEIINHVQSLQ 243 8*************************9....888999999999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MATRSNGTAS DRGEVEVLES LQFTDEIQHL MSAPTTDNAG FFTALLELPA PQAVQLLHSP 60 ESAKLIAAPV PNVEDFKGSF HFPSNSGLIE RAARFSVFAG EGNNNTKKSN SPETTSNISS 120 ANLEKAVKSE PAESESSQPL VSDPTVEKRS IKRKDREKKV KESKKKSKTA ANESSEDAEK 180 LPYVHVRARR GQATDSHSLA ERARREKINA RMKLLQELVP GCNKISGTAL VLDEIINHVQ 240 SLQHQVEFLS MRLAAVNPRI DFNLDSIFTA ESGSIIDCNF PSMVMPMMWP EVQVNGNRQQ 300 YQQQWHFDAL QQPVWGREEV CNNYITPENS LLSYDSSTNS VTLHSNQLKM EL

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MATRSNGTAS DRGEVEVLES LQFTDEIQHL MSAPTTDNAG FFTALLELPA PQAVQLLHSP  60
ESAKLIAAPV PNVEDFKGSF HFPSNSGLIE RAARFSVFAG EGNNNTKKSN SPETTSNISS  120
ANLEKAVKSE PAESESSQPL VSDPTVEKRS IKRKDREKKV KESKKKSKTA ANESSEDAEK  180
LPYVHVRARR GQATDSHSLA ERARREKINA RMKLLQELVP GCNKISGTAL VLDEIINHVQ  240
SLQHQVEFLS MRLAAVNPRI DFNLDSIFTA ESGSIIDCNF PSMVMPMMWP EVQVNGNRQQ  300
YQQQWHFDAL QQPVWGREEV CNNYITPENS LLSYDSSTNS VTLHSNQLKM EL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	152	166	KRKDREKKVKESKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57800.2	1e-103	bHLH family protein