PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022766532.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 434aa MW: 47645.1 Da PI: 9.6346

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022766532.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.8	0.00035	193	215	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 C+ Cg++F+ ++L+ H+ + H XP_022766532.1 193 ACSQCGEVFPKIESLELHQAVrH 215 6******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MKERARSATL LLFYYYLLAL FFMALLTFLP EPAAEPTKQQ PSTKRRRKQK KQPSSWDQIK 60 NLLTCKQIEG SKVHDPSKNN PPQHHGYSKL GSSCNSICSF RDVVHSNTKV VHRADNSPES 120 STVDQETGLL RRKAANGSSS RSLSGSTRSN SSSTYTTSSS SRAMQFRKLS GCYECHMIVD 180 PSRHPSSRTT ICACSQCGEV FPKIESLELH QAVRHAVSEL GPEDSGRNIV EIIFKSSWLK 240 KDNPICKIER ILKVHNTQRT IQRFEDCRDA VKTRAVNGTR KNPRLAADGN ELLRFHCTTL 300 SCSLGARGSS SLCGSVPGCG VCTIIRHGFQ NKGGTAGAAE FKGVRTTASS GRAHDSLKCT 360 DGRRAMLVCR VIAGRVKPVT EDAPLEEDNS SSSVGSYDSL AAYAGAYSNL EELVVFNPRA 420 ILPCFVVIYK ALES

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MKERARSATL LLFYYYLLAL FFMALLTFLP EPAAEPTKQQ PSTKRRRKQK KQPSSWDQIK  60
NLLTCKQIEG SKVHDPSKNN PPQHHGYSKL GSSCNSICSF RDVVHSNTKV VHRADNSPES  120
STVDQETGLL RRKAANGSSS RSLSGSTRSN SSSTYTTSSS SRAMQFRKLS GCYECHMIVD  180
PSRHPSSRTT ICACSQCGEV FPKIESLELH QAVRHAVSEL GPEDSGRNIV EIIFKSSWLK  240
KDNPICKIER ILKVHNTQRT IQRFEDCRDA VKTRAVNGTR KNPRLAADGN ELLRFHCTTL  300
SCSLGARGSS SLCGSVPGCG VCTIIRHGFQ NKGGTAGAAE FKGVRTTASS GRAHDSLKCT  360
DGRRAMLVCR VIAGRVKPVT EDAPLEEDNS SSSVGSYDSL AAYAGAYSNL EELVVFNPRA  420
ILPCFVVIYK ALES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-171	C2H2 family protein