PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022766436.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 684aa MW: 75470.9 Da PI: 6.9714

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022766436.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.9	3.9e-16	329	388	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022766436.1 329 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 388 78*****************988886678446***********************98 PP
2	AP2	45.6	1.8e-14	433	482	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022766436.1 433 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 482 9*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 684 aa Download sequence
MKTMNDNSNG SNNHWLGFSL SPNMKMEVAT DPQHRHHQYP HHSQAASAAA PAVSCISNAV 60 PTSFYLPSHL NGTGICYGVG ETGGFHAPLS VMPLKSDGSL CIMEALSRSQ SEGIVPTSSP 120 KLEDFLGGAT METHQYGSHE REAMALSLDS MYYHQNANQE TNRHHSLELL QEPFRQQDQE 180 FDVQTHPYYS ALACQGMYQS PLEETKDAQL THCNSQIPQL GEETMPCFKN WATRQYSTHS 240 SLEQQMTNSM VDDGAASGSV GTMGCGDLQS LSLSMSPGSQ SSCVTAPRQI SPTATECVAM 300 ETKKRGTGKV GQKQPVHRKS IDTFGQRTSQ YRGVTRHRWT GRYEAHLWDN SCKKEGQTRK 360 GRQVYLGGYD MEEKAARAYD LAALKYWGPS THINFPLENY RDELEEMKNM SRQEYVAHLR 420 RKSSGFSRGA SMYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF 480 RGVNAVTNFD ITRYDVKRIM ASNTLLAGEL ARGKKETDSN NEANDYSTPI LTNEETQPDV 540 NNRNASDWKM ALYQSPQQQP SIGAVESLDQ KSVSTGNYRN PTFSMALQDL VVDSVSSSQP 600 LLDESTKLGT QYSNPSSLVT CVSDSREGSP DKTGSARLFA KPPLASKLIS PTNGVSCFPS 660 AAAELRPGAL SMAHLPLFAA WNDT

Sequence ? help Back to Top

Protein Sequence Length: 684 aa Download sequence

MKTMNDNSNG SNNHWLGFSL SPNMKMEVAT DPQHRHHQYP HHSQAASAAA PAVSCISNAV  60
PTSFYLPSHL NGTGICYGVG ETGGFHAPLS VMPLKSDGSL CIMEALSRSQ SEGIVPTSSP  120
KLEDFLGGAT METHQYGSHE REAMALSLDS MYYHQNANQE TNRHHSLELL QEPFRQQDQE  180
FDVQTHPYYS ALACQGMYQS PLEETKDAQL THCNSQIPQL GEETMPCFKN WATRQYSTHS  240
SLEQQMTNSM VDDGAASGSV GTMGCGDLQS LSLSMSPGSQ SSCVTAPRQI SPTATECVAM  300
ETKKRGTGKV GQKQPVHRKS IDTFGQRTSQ YRGVTRHRWT GRYEAHLWDN SCKKEGQTRK  360
GRQVYLGGYD MEEKAARAYD LAALKYWGPS THINFPLENY RDELEEMKNM SRQEYVAHLR  420
RKSSGFSRGA SMYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF  480
RGVNAVTNFD ITRYDVKRIM ASNTLLAGEL ARGKKETDSN NEANDYSTPI LTNEETQPDV  540
NNRNASDWKM ALYQSPQQQP SIGAVESLDQ KSVSTGNYRN PTFSMALQDL VVDSVSSSQP  600
LLDESTKLGT QYSNPSSLVT CVSDSREGSP DKTGSARLFA KPPLASKLIS PTNGVSCFPS  660
AAAELRPGAL SMAHLPLFAA WNDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-129	AP2 family protein