PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022766363.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 440aa MW: 48646.6 Da PI: 10.0597

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022766363.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.6	0.0002	208	230	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg+ F ++L+ H+ + H XP_022766363.1 208 SCPECGEIFMKAEDLELHQAVrH 230 8******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MAGPTHQKKP TKETYQNQKK RPQKNDKPPS WAVVKGLFFG KHLQPQQKQQ QQQRQQQHQQ 60 QQNQEQQKQQ KQQEKKKQKQ QQPAQVMEET GKKCKKMRCS GSLCSNTKVM HRPETASPEV 120 HKKRASLGSS SNNDASSRSM KAPLHELNGV VSSTNSSLSV SSASASSVGG SFRGMPFRRF 180 SGCYECRMVV DPVLGIARDP SLRGSICSCP ECGEIFMKAE DLELHQAVRH AVSELGPEDT 240 SKNIVEIIFQ SSWLKKQTPI CQIDRILKVH NTPKTISKFE EYRDSIKSKA TKLPKKHPRC 300 IADGNELLRF HCTTFACSLG LKGSSNLCNS IPNCNVCSII KNGFKVAQEL TGGSNGKGIL 360 TTATSGKAHD KAAGVEEGND KRAMLVCRVI AGRVKKSMEG GMEDYDSVAG AAGVYSNLDE 420 LYVFNPKAIL PCFVVIYRGF

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MAGPTHQKKP TKETYQNQKK RPQKNDKPPS WAVVKGLFFG KHLQPQQKQQ QQQRQQQHQQ  60
QQNQEQQKQQ KQQEKKKQKQ QQPAQVMEET GKKCKKMRCS GSLCSNTKVM HRPETASPEV  120
HKKRASLGSS SNNDASSRSM KAPLHELNGV VSSTNSSLSV SSASASSVGG SFRGMPFRRF  180
SGCYECRMVV DPVLGIARDP SLRGSICSCP ECGEIFMKAE DLELHQAVRH AVSELGPEDT  240
SKNIVEIIFQ SSWLKKQTPI CQIDRILKVH NTPKTISKFE EYRDSIKSKA TKLPKKHPRC  300
IADGNELLRF HCTTFACSLG LKGSSNLCNS IPNCNVCSII KNGFKVAQEL TGGSNGKGIL  360
TTATSGKAHD KAAGVEEGND KRAMLVCRVI AGRVKKSMEG GMEDYDSVAG AAGVYSNLDE  420
LYVFNPKAIL PCFVVIYRGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-103	C2H2 family protein