PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022766277.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 550aa MW: 61746.3 Da PI: 8.7718

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022766277.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	89.9	2.9e-28	52	136	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+ +e+laL+++r+ m++ +r+++lk+plWe+vs+k++e g++rs+k+Ckek+en+ k++k++k+g+ ++ + +t+++fdqlea XP_022766277.1 52 RWPWEETLALLKIRSGMDSVFRDSSLKGPLWEDVSRKLAELGYHRSAKKCKEKFENVYKYHKRTKDGRAGK--ADGKTYRFFDQLEA 136 8******************************************************************96..66678*****85 PP
2	trihelix	107.6	8.3e-34	392	477	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev aLi++r++++ +++++ k+plWee+s++mr+ g++rs+k+Ckekwen+nk++kk+keg+k+r +e+s+tcpyf+ql+a XP_022766277.1 392 RWPKAEVEALIKVRTNLDIKYQENGPKAPLWEEISAAMRKLGYNRSAKRCKEKWENINKYFKKVKEGNKRR-PEDSKTCPYFHQLDA 477 8******************************************************************97.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MMGGSSTVET SAEAMAAPGI HDGSEIGMVG SNSGKEDKGR VDEGDRTFGG NRWPWEETLA 60 LLKIRSGMDS VFRDSSLKGP LWEDVSRKLA ELGYHRSAKK CKEKFENVYK YHKRTKDGRA 120 GKADGKTYRF FDQLEALDNL HSLRSLSPPK PQTPTPTSAA MPWTNPPSAS NIHVPSSTIN 180 PINIPQTNAT PSINLTISNH AVPNHSINPH SHNIQSSFHY ISSNLFSTST SSSTASDNNS 240 DQGSSKKKWK EFFRRLTKQV FEKQEELQNK LLQTIEKCEQ ERMAREEAWR IQEMTRINRE 300 HEILVQERSN AAANDAAVIA FLQKISGQKP NTVKVQPLEN PQPPPPPAPI APLSLPPPLQ 360 QAQHQSPTKA LNFGNWKMSN GGNNAVSPSP SRWPKAEVEA LIKVRTNLDI KYQENGPKAP 420 LWEEISAAMR KLGYNRSAKR CKEKWENINK YFKKVKEGNK RRPEDSKTCP YFHQLDAIYK 480 ERISKNENHL VLPGMGPDST MVPLMVRPEQ KLPPQQEISQ LAEATTMDEA ERENVDQIQD 540 EEEEGGVSEE

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MMGGSSTVET SAEAMAAPGI HDGSEIGMVG SNSGKEDKGR VDEGDRTFGG NRWPWEETLA  60
LLKIRSGMDS VFRDSSLKGP LWEDVSRKLA ELGYHRSAKK CKEKFENVYK YHKRTKDGRA  120
GKADGKTYRF FDQLEALDNL HSLRSLSPPK PQTPTPTSAA MPWTNPPSAS NIHVPSSTIN  180
PINIPQTNAT PSINLTISNH AVPNHSINPH SHNIQSSFHY ISSNLFSTST SSSTASDNNS  240
DQGSSKKKWK EFFRRLTKQV FEKQEELQNK LLQTIEKCEQ ERMAREEAWR IQEMTRINRE  300
HEILVQERSN AAANDAAVIA FLQKISGQKP NTVKVQPLEN PQPPPPPAPI APLSLPPPLQ  360
QAQHQSPTKA LNFGNWKMSN GGNNAVSPSP SRWPKAEVEA LIKVRTNLDI KYQENGPKAP  420
LWEEISAAMR KLGYNRSAKR CKEKWENINK YFKKVKEGNK RRPEDSKTCP YFHQLDAIYK  480
ERISKNENHL VLPGMGPDST MVPLMVRPEQ KLPPQQEISQ LAEATTMDEA ERENVDQIQD  540
EEEEGGVSEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-134	Trihelix family protein