PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022766162.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 491aa MW: 54202.7 Da PI: 6.6492

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022766162.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.2	7.2e-17	167	216	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d+ rk+++lg f+ta Aa+a+++a+ k++g XP_022766162.1 167 SQYRGVTFYRRTGRWESHIWDC-----RKQVYLGGFDTAHAAARAYDRAAIKFRG 216 78*****************5.....5**********************997 PP
2	AP2	42	2.2e-13	259	309	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g XP_022766162.1 259 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEIEAARAYDKAAIKCNG 309 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MMLDLNLSTI LGGDDDSAVM AGENNPFDIS GYNNTNQMVS SGSYDSSIVN ADTTTTTGDD 60 DSCSNIAATD TFAYSFGILK TAQEEPENNR TTIPLFPASV EGNGGKSTGS SQKKWLDLGG 120 SQEASEHYHG GGGAAEQRIV TQQQYQQQAQ LRQQVKKSRR GPRSRSSQYR GVTFYRRTGR 180 WESHIWDCRK QVYLGGFDTA HAAARAYDRA AIKFRGVDAD INFNVSDYDD DIKQMSNFTK 240 EEFVHILRRQ STGFSRGSSK YRGVTLHKCG RWEARMGQFL GKKYIYLGLF DSEIEAARAY 300 DKAAIKCNGR EAVTNFEPST YEEESEKGDQ NQGLDLNLGI APPCTSDPQK ESDNSSNWDG 360 LPVERGARIE NSVLTTMSLQ PSLGQAMAFK HIPNWNGANS TFFPVYRERV IEKRIEVGSP 420 PSLAWQIQGP YSGTNPVPLF PTAASSGFSS SIITSSSAAT GQLHNPNTTF LHHHYPPVIT 480 NPNISHFYCR S

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MMLDLNLSTI LGGDDDSAVM AGENNPFDIS GYNNTNQMVS SGSYDSSIVN ADTTTTTGDD  60
DSCSNIAATD TFAYSFGILK TAQEEPENNR TTIPLFPASV EGNGGKSTGS SQKKWLDLGG  120
SQEASEHYHG GGGAAEQRIV TQQQYQQQAQ LRQQVKKSRR GPRSRSSQYR GVTFYRRTGR  180
WESHIWDCRK QVYLGGFDTA HAAARAYDRA AIKFRGVDAD INFNVSDYDD DIKQMSNFTK  240
EEFVHILRRQ STGFSRGSSK YRGVTLHKCG RWEARMGQFL GKKYIYLGLF DSEIEAARAY  300
DKAAIKCNGR EAVTNFEPST YEEESEKGDQ NQGLDLNLGI APPCTSDPQK ESDNSSNWDG  360
LPVERGARIE NSVLTTMSLQ PSLGQAMAFK HIPNWNGANS TFFPVYRERV IEKRIEVGSP  420
PSLAWQIQGP YSGTNPVPLF PTAASSGFSS SIITSSSAAT GQLHNPNTTF LHHHYPPVIT  480
NPNISHFYCR S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	6e-99	AP2 family protein