PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022766151.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 491aa MW: 53413.6 Da PI: 9.7748 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.2 | 3e-05 | 63 | 85 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H XP_022766151.1 63 FICEICNKGFQRDQNLQLHRRGH 85 89*******************88 PP | |||||||
2 | zf-C2H2 | 12.8 | 0.00036 | 139 | 161 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ XP_022766151.1 139 WKCEKCSKKYAVQSDWKAHSKTC 161 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 491 aa Download sequence |
MSGDAFSMPA SIGGFVQDQN NPNPNPKANP NPVKKKRNLP GTPDPDAEVI ALSPKTLMAT 60 NRFICEICNK GFQRDQNLQL HRRGHNLPWK LRQRTNKEVR KKVYICPEKT CVHHDPSRAL 120 GDLTGIKKHY SRKHGEKKWK CEKCSKKYAV QSDWKAHSKT CGTREYKCDC GTLFSRKDSF 180 ITHRAFCDAL AEESARLTSA ATTNLNFRND TVNLPHGFAG RGVQDVAGIP QFGSGFAQDY 240 SGMSASGLPE MVQMASGNLF GSSSLTNFCN HSNFPGFDKS GATSTNSNLS LSPLPQGLKE 300 EGGSKGNLME SFSSLYSDTQ YKQSKPAAPM SATALLQKAA QMGSTRSNPS FFGNSFGVMS 360 SSSSHTASFS STQNRNDQLH QVYPNVKQQQ ENFMASSSVS MSVDAGLGSS NLNPMTSTAS 420 NNHDQLISQT GAKKSDPSQL KTHPGSNSID QSLTRDFLGM GNDQSARPFL PQELAKFASI 480 GSTMSQFTSN H |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 90 | 102 | KLRQRTNKEVRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03150.1 | 1e-130 | C2H2 family protein |