PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022766151.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 491aa    MW: 53413.6 Da    PI: 9.7748
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022766151.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.23e-056385123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    + C++C+k F r  nL+ H r H
  XP_022766151.1 63 FICEICNKGFQRDQNLQLHRRGH 85
                    89*******************88 PP

2zf-C2H212.80.00036139161123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     +kC++C+k +  +s+ k H +t+
  XP_022766151.1 139 WKCEKCSKKYAVQSDWKAHSKTC 161
                     58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 491 aa     Download sequence    
MSGDAFSMPA SIGGFVQDQN NPNPNPKANP NPVKKKRNLP GTPDPDAEVI ALSPKTLMAT  60
NRFICEICNK GFQRDQNLQL HRRGHNLPWK LRQRTNKEVR KKVYICPEKT CVHHDPSRAL  120
GDLTGIKKHY SRKHGEKKWK CEKCSKKYAV QSDWKAHSKT CGTREYKCDC GTLFSRKDSF  180
ITHRAFCDAL AEESARLTSA ATTNLNFRND TVNLPHGFAG RGVQDVAGIP QFGSGFAQDY  240
SGMSASGLPE MVQMASGNLF GSSSLTNFCN HSNFPGFDKS GATSTNSNLS LSPLPQGLKE  300
EGGSKGNLME SFSSLYSDTQ YKQSKPAAPM SATALLQKAA QMGSTRSNPS FFGNSFGVMS  360
SSSSHTASFS STQNRNDQLH QVYPNVKQQQ ENFMASSSVS MSVDAGLGSS NLNPMTSTAS  420
NNHDQLISQT GAKKSDPSQL KTHPGSNSID QSLTRDFLGM GNDQSARPFL PQELAKFASI  480
GSTMSQFTSN H
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
190102KLRQRTNKEVRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03150.11e-130C2H2 family protein