PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022766127.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 292aa MW: 31671.5 Da PI: 8.0304 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.8 | 0.00017 | 194 | 216 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H XP_022766127.1 194 HECSICGAEFSSGQALGGHMRRH 216 78********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MMMEGREEVV VCKDQLQIIK GKRTKRPRPL SPLTLAMASS TTTSSGGESG GEGGRNSNDS 60 RGFDRAVASP TTSVELAEST EEEEDMANCL ILLAQGQTRK LASEPASLAT ASKTAGIYVH 120 QCKTCNRCFP SFQALGGHRA SHKKPKINNE ENNKGLIFVK EDDHDQFNNM NTSFSLQITN 180 KAAVLGNSNK SKVHECSICG AEFSSGQALG GHMRRHRTFT NAATTTATTT LSVGTRISSP 240 EPEESKKSRT VLQLDLNLPA PEDDHHREPK LSFASKEKLL VFSASSLVDC HY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 25 | 29 | KRPRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28200.1 | 4e-46 | C2H2 family protein |