PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022766005.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 295aa MW: 32678.2 Da PI: 8.4172

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022766005.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.9	1.8e-05	267	289	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp+C+k F+++ L+ H + H XP_022766005.1 267 VCPKCSKGFRDPVALVEHVERdH 289 7*****************99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MGTPEFPDLG KHCSVEDCKQ IDFLPFTCDR CHLVYCLEHR SYIKHHCPNA DKKDVTVVIC 60 PLCAKGVRLI PDEDPNINWE THVNTECDPS NYDKVTKKKK CPVPGCREVL TFSNTIKCRD 120 CTIDHCLKHR FGPDHKCPGP KKPESSFPFM GLLSRSRKEE SKPSRVPATS SSRWATSFLN 180 AASTVRASAE ASMTKLSSEL SKKWQIARDG VGLSSSSSSS SSGSAGQVEE CPQCRVKFSS 240 VTALVEHVEK VHGRNNHSRV FKMSIDVCPK CSKGFRDPVA LVEHVERDHG GTSKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41835.1	1e-125	C2H2 family protein