PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022765392.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 1468aa MW: 163233 Da PI: 6.6518

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022765392.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00083	1436	1462	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C+ Cg sF+ s++ rH r+ H XP_022765392.1 1436 YQCKveGCGLSFRFVSDFSRHRRKtgH 1462 99*********************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 1468 aa Download sequence
MKGVASTPQF GVQKQVWQSG EIYTLEQFES KSKTFAKNLL GVLKEVSPLH IEALFWKVAS 60 EKPIYVEYAN DVPGSGFGEP EGQFQYFHRR RRKRMSYRRE ISDCKKDQIH TVKNSHIDEI 120 KNSSVKSDPD TCLETPKSST SLSTMASDGN SHSKQKSGNA SNDIEGTAGW KLSNSPWNLQ 180 VIARSAGSLT RFMPDDIPGV TSPMVYIGML FSWFAWHVED HELHSMNFLH TGSSKTWYAV 240 PGDYAFSFEE VIRTEAYGGN IDRLVSLLPA ALSLLGEKTT LLSPELIVAS GIPCCRLIQN 300 PGEFVVTFPR AYHVGFSHGF NCGEAANFGT PQWLQVAKEA AVRRAAMNYL PMLSHQQLLY 360 LLTMSFVSRV PRSFLPGARS SRLRDRRKEE REVLVKKAFI EDLLTENKLL SVLLKRGSTY 420 RAIIWDPDLL PYTSKDSELP SGPATVSTKL QENVSNSHCE NNSNQNNLLE EMSLYMENMN 480 YLYLNDDLTC DFQVDSGTLA CVACGILGYP FMSVVQPSDG ATMELLSADH LSIQGPTVLE 540 PKNAHSCPGL NHPVEDSISD NVNHVADLSQ PYKDVPATSI TKFSEGWDTS NKYLRPRIFC 600 LQHAVQVEEL LQSKGGAKIL VICHSDYQKI KAHAVPLAED IGIPFNYNDV PLDAASQEDL 660 NLISFAIDDE HDEIGEDWTS KLGVNLRFCV KVRKNSPFKQ VQHALPLSGL FSDKCSSSEL 720 FNINWRSRKS RSKGKLNHPS APSKPCESVE MKVDKKLAEK IDGNITKNEP KIIQYSRRKK 780 GKPDYSTGAG EGLELLKDDP PREDSSAACQ LLDEHGGNKS KIKFKSESAI LFSSLSTKSS 840 QAQLEIQNTI VVEVVQKDQS KVLKESDGEA CSLTAFASSQ KQCEIKIMQR ASENDEMSPS 900 NECSKCCLVA ADERFVENTA TVSEICNPVS EGQFEELAAR YDLINLSNLA ILHSAQPSAG 960 RFDPGLEDIT VEKSCMNEGI CSCMTSDNKM QQETEAASRN NNEGILGHNK VINKTNLGSK 1020 DFSSGVSLGN EMQHKTNTGS GSQFEPFFSS PTLTKGPSTI TVGHRSEVPT EPCAAADSCD 1080 GAISKNKAQK QEILINASKE ELLCGSIMPM EFDRPTSLSV EENSVISKNP CAKKDPHADV 1140 TFNVEELQEI GATKGTSGDE VIACSHLPIK DKQPTPIVME ACSEVQRESS SQKKSCTDAT 1200 ADDGRHENDI RNERNEEESV SCCVTPINQT TIPIQKYSRT HRESHATVNV DVDVDGEVCS 1260 SVDYRDLQSA VTNCRSSAMN GRKRKRELEE ASEKDGDNGF IRSPCEGLRP RAQKDATSSV 1320 NEGKISQEVL PTEETRKPSI HTQSKKVIKK GSHRCDLEGC HMNFGTKEEL RLHKRNRCPY 1380 EGCGKKFRSH KYAILHQRVH EDDRPLKCPW KGCSMSFKWA WARTEHIRVH TGERPYQCKV 1440 EGCGLSFRFV SDFSRHRRKT GHYMDFSA

Sequence ? help Back to Top

Protein Sequence Length: 1468 aa Download sequence

MKGVASTPQF GVQKQVWQSG EIYTLEQFES KSKTFAKNLL GVLKEVSPLH IEALFWKVAS  60
EKPIYVEYAN DVPGSGFGEP EGQFQYFHRR RRKRMSYRRE ISDCKKDQIH TVKNSHIDEI  120
KNSSVKSDPD TCLETPKSST SLSTMASDGN SHSKQKSGNA SNDIEGTAGW KLSNSPWNLQ  180
VIARSAGSLT RFMPDDIPGV TSPMVYIGML FSWFAWHVED HELHSMNFLH TGSSKTWYAV  240
PGDYAFSFEE VIRTEAYGGN IDRLVSLLPA ALSLLGEKTT LLSPELIVAS GIPCCRLIQN  300
PGEFVVTFPR AYHVGFSHGF NCGEAANFGT PQWLQVAKEA AVRRAAMNYL PMLSHQQLLY  360
LLTMSFVSRV PRSFLPGARS SRLRDRRKEE REVLVKKAFI EDLLTENKLL SVLLKRGSTY  420
RAIIWDPDLL PYTSKDSELP SGPATVSTKL QENVSNSHCE NNSNQNNLLE EMSLYMENMN  480
YLYLNDDLTC DFQVDSGTLA CVACGILGYP FMSVVQPSDG ATMELLSADH LSIQGPTVLE  540
PKNAHSCPGL NHPVEDSISD NVNHVADLSQ PYKDVPATSI TKFSEGWDTS NKYLRPRIFC  600
LQHAVQVEEL LQSKGGAKIL VICHSDYQKI KAHAVPLAED IGIPFNYNDV PLDAASQEDL  660
NLISFAIDDE HDEIGEDWTS KLGVNLRFCV KVRKNSPFKQ VQHALPLSGL FSDKCSSSEL  720
FNINWRSRKS RSKGKLNHPS APSKPCESVE MKVDKKLAEK IDGNITKNEP KIIQYSRRKK  780
GKPDYSTGAG EGLELLKDDP PREDSSAACQ LLDEHGGNKS KIKFKSESAI LFSSLSTKSS  840
QAQLEIQNTI VVEVVQKDQS KVLKESDGEA CSLTAFASSQ KQCEIKIMQR ASENDEMSPS  900
NECSKCCLVA ADERFVENTA TVSEICNPVS EGQFEELAAR YDLINLSNLA ILHSAQPSAG  960
RFDPGLEDIT VEKSCMNEGI CSCMTSDNKM QQETEAASRN NNEGILGHNK VINKTNLGSK  1020
DFSSGVSLGN EMQHKTNTGS GSQFEPFFSS PTLTKGPSTI TVGHRSEVPT EPCAAADSCD  1080
GAISKNKAQK QEILINASKE ELLCGSIMPM EFDRPTSLSV EENSVISKNP CAKKDPHADV  1140
TFNVEELQEI GATKGTSGDE VIACSHLPIK DKQPTPIVME ACSEVQRESS SQKKSCTDAT  1200
ADDGRHENDI RNERNEEESV SCCVTPINQT TIPIQKYSRT HRESHATVNV DVDVDGEVCS  1260
SVDYRDLQSA VTNCRSSAMN GRKRKRELEE ASEKDGDNGF IRSPCEGLRP RAQKDATSSV  1320
NEGKISQEVL PTEETRKPSI HTQSKKVIKK GSHRCDLEGC HMNFGTKEEL RLHKRNRCPY  1380
EGCGKKFRSH KYAILHQRVH EDDRPLKCPW KGCSMSFKWA WARTEHIRVH TGERPYQCKV  1440
EGCGLSFRFV SDFSRHRRKT GHYMDFSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	0.0	C2H2 family protein