PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022765390.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 1580aa MW: 175479 Da PI: 6.7401

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022765390.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.5	0.0009	1548	1574	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C+ Cg sF+ s++ rH r+ H XP_022765390.1 1548 YQCKveGCGLSFRFVSDFSRHRRKtgH 1574 99*********************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 1580 aa Download sequence
MGNLEIPKWL KRLPLAPEFR PTDTEFADPI AYISKIEKEV GAYGICKIIP PLPKPSKKYV 60 FDNLNRSLSK CPELGSGVDV SKNVGSVLSS GDTGVDEGEG RAVFTTRHQE LGQSGKRMKG 120 VASTPQFGVQ KQVWQSGEIY TLEQFESKSK TFAKNLLGVL KEVSPLHIEA LFWKVASEKP 180 IYVEYANDVP GSGFGEPEGQ FQYFHRRRRK RMSYRREISD CKKDQIHTVK NSHIDEIKNS 240 SVKSDPDTCL ETPKSSTSLS TMASDGNSHS KQKSGNASND IEGTAGWKLS NSPWNLQVIA 300 RSAGSLTRFM PDDIPGVTSP MVYIGMLFSW FAWHVEDHEL HSMNFLHTGS SKTWYAVPGD 360 YAFSFEEVIR TEAYGGNIDR LAALSLLGEK TTLLSPELIV ASGIPCCRLI QNPGEFVVTF 420 PRAYHVGFSH GFNCGEAANF GTPQWLQVAK EAAVRRAAMN YLPMLSHQQL LYLLTMSFVS 480 RVPRSFLPGA RSSRLRDRRK EEREVLVKKA FIEDLLTENK LLSVLLKRGS TYRAIIWDPD 540 LLPYTSKDSE LPSGPATVST KLQENVSNSH CENNSNQNNL LEEMSLYMEN MNYLYLNDDL 600 TCDFQVDSGT LACVACGILG YPFMSVVQPS DGATMELLSA DHLSIQGPTV LEPKNAHSCP 660 GLNHPVEDSI SDNVNHVADL SQPYKDVPAT SITKFSEGWD TSNKYLRPRI FCLQHAVQVE 720 ELLQSKGGAK ILVICHSDYQ KIKAHAVPLA EDIGIPFNYN DVPLDAASQE DLNLISFAID 780 DEHDEIGEDW TSKLGVNLRF CVKVRKNSPF KQVQHALPLS GLFSDKCSSS ELFNINWRSR 840 KSRSKGKLNH PSAPSKPCES VEMKVDKKLA EKIDGNITKN EPKIIQYSRR KKGKPDYSTG 900 AGEGLELLKD DPPREDSSAA CQLLDEHGGN KSKIKFKSES AILFSSLSTK SSQAQLEIQN 960 TIVVEVVQKD QSKVLKESDG EACSLTAFAS SQKQCEIKIM QRASENDEMS PSNECSKCCL 1020 VAADERFVEN TATVSEICNP VSEGQFEELA ARYDLINLSN LAILHSAQPS AGRFDPGLED 1080 ITVEKSCMNE GICSCMTSDN KMQQETEAAS RNNNEGILGH NKVINKTNLG SKDFSSGVSL 1140 GNEMQHKTNT GSGSQFEPFF SSPTLTKGPS TITVGHRSEV PTEPCAAADS CDGAISKNKA 1200 QKQEILINAS KEELLCGSIM PMEFDRPTSL SVEENSVISK NPCAKKDPHA DVTFNVEELQ 1260 EIGATKGTSG DEVIACSHLP IKDKQPTPIV MEACSEVQRE SSSQKKSCTD ATADDGRHEN 1320 DIRNERNEEE SVSCCVTPIN QTTIPIQKYS RTHRESHATV NVDVDVDGEV CSSVDYRDLQ 1380 SAVTNCRSSA MNGRKRKREL EEASEKDGDN GFIRSPCEGL RPRAQKDATS SVNEGKISQE 1440 VLPTEETRKP SIHTQSKKVI KKGSHRCDLE GCHMNFGTKE ELRLHKRNRC PYEGCGKKFR 1500 SHKYAILHQR VHEDDRPLKC PWKGCSMSFK WAWARTEHIR VHTGERPYQC KVEGCGLSFR 1560 FVSDFSRHRR KTGHYMDFSA

Sequence ? help Back to Top

Protein Sequence Length: 1580 aa Download sequence

MGNLEIPKWL KRLPLAPEFR PTDTEFADPI AYISKIEKEV GAYGICKIIP PLPKPSKKYV  60
FDNLNRSLSK CPELGSGVDV SKNVGSVLSS GDTGVDEGEG RAVFTTRHQE LGQSGKRMKG  120
VASTPQFGVQ KQVWQSGEIY TLEQFESKSK TFAKNLLGVL KEVSPLHIEA LFWKVASEKP  180
IYVEYANDVP GSGFGEPEGQ FQYFHRRRRK RMSYRREISD CKKDQIHTVK NSHIDEIKNS  240
SVKSDPDTCL ETPKSSTSLS TMASDGNSHS KQKSGNASND IEGTAGWKLS NSPWNLQVIA  300
RSAGSLTRFM PDDIPGVTSP MVYIGMLFSW FAWHVEDHEL HSMNFLHTGS SKTWYAVPGD  360
YAFSFEEVIR TEAYGGNIDR LAALSLLGEK TTLLSPELIV ASGIPCCRLI QNPGEFVVTF  420
PRAYHVGFSH GFNCGEAANF GTPQWLQVAK EAAVRRAAMN YLPMLSHQQL LYLLTMSFVS  480
RVPRSFLPGA RSSRLRDRRK EEREVLVKKA FIEDLLTENK LLSVLLKRGS TYRAIIWDPD  540
LLPYTSKDSE LPSGPATVST KLQENVSNSH CENNSNQNNL LEEMSLYMEN MNYLYLNDDL  600
TCDFQVDSGT LACVACGILG YPFMSVVQPS DGATMELLSA DHLSIQGPTV LEPKNAHSCP  660
GLNHPVEDSI SDNVNHVADL SQPYKDVPAT SITKFSEGWD TSNKYLRPRI FCLQHAVQVE  720
ELLQSKGGAK ILVICHSDYQ KIKAHAVPLA EDIGIPFNYN DVPLDAASQE DLNLISFAID  780
DEHDEIGEDW TSKLGVNLRF CVKVRKNSPF KQVQHALPLS GLFSDKCSSS ELFNINWRSR  840
KSRSKGKLNH PSAPSKPCES VEMKVDKKLA EKIDGNITKN EPKIIQYSRR KKGKPDYSTG  900
AGEGLELLKD DPPREDSSAA CQLLDEHGGN KSKIKFKSES AILFSSLSTK SSQAQLEIQN  960
TIVVEVVQKD QSKVLKESDG EACSLTAFAS SQKQCEIKIM QRASENDEMS PSNECSKCCL  1020
VAADERFVEN TATVSEICNP VSEGQFEELA ARYDLINLSN LAILHSAQPS AGRFDPGLED  1080
ITVEKSCMNE GICSCMTSDN KMQQETEAAS RNNNEGILGH NKVINKTNLG SKDFSSGVSL  1140
GNEMQHKTNT GSGSQFEPFF SSPTLTKGPS TITVGHRSEV PTEPCAAADS CDGAISKNKA  1200
QKQEILINAS KEELLCGSIM PMEFDRPTSL SVEENSVISK NPCAKKDPHA DVTFNVEELQ  1260
EIGATKGTSG DEVIACSHLP IKDKQPTPIV MEACSEVQRE SSSQKKSCTD ATADDGRHEN  1320
DIRNERNEEE SVSCCVTPIN QTTIPIQKYS RTHRESHATV NVDVDVDGEV CSSVDYRDLQ  1380
SAVTNCRSSA MNGRKRKREL EEASEKDGDN GFIRSPCEGL RPRAQKDATS SVNEGKISQE  1440
VLPTEETRKP SIHTQSKKVI KKGSHRCDLE GCHMNFGTKE ELRLHKRNRC PYEGCGKKFR  1500
SHKYAILHQR VHEDDRPLKC PWKGCSMSFK WAWARTEHIR VHTGERPYQC KVEGCGLSFR  1560
FVSDFSRHRR KTGHYMDFSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	0.0	C2H2 family protein