PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022765389.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 1585aa MW: 175988 Da PI: 6.7401

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022765389.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.5	0.00091	1553	1579	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C+ Cg sF+ s++ rH r+ H XP_022765389.1 1553 YQCKveGCGLSFRFVSDFSRHRRKtgH 1579 99*********************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 1585 aa Download sequence
MGNLEIPKWL KRLPLAPEFR PTDTEFADPI AYISKIEKEV GAYGICKIIP PLPKPSKKYV 60 FDNLNRSLSK CPELGSGVDV SKNVGSVLSS GDTGVDEGEG RAVFTTRHQE LGQSGKRMKG 120 VASTPQFGVQ KQVWQSGEIY TLEQFESKSK TFAKNLLGVL KEVSPLHIEA LFWKVASEKP 180 IYVEYANDVP GSGFGEPEGQ FQYFHRRRRK RMSYRREISD CKKDQIHTVK NSHIDEIKNS 240 SVKSDPDTCL ETPKSSTSLS TMASDGNSHS KQKSGNASND IEGTAGWKLS NSPWNLQVIA 300 RSAGSLTRFM PDDIPGVTSP MVYIGMLFSW FAWHVEDHEL HSMNFLHTGS SKTWYAVPGD 360 YAFSFEEVIR TEAYGGNIDR LVSLLPAALS LLGEKTTLLS PELIVASGIP CCRLIQNPGE 420 FVVTFPRAYH VGFSHGFNCG EAANFGTPQW LQVAKEAAVR RAAMNYLPML SHQQLLYLLT 480 MSFVSRVPRS FLPGARSSRL RDRRKEEREV LVKKAFIEDL LTENKLLSVL LKRGSTYRAI 540 IWDPDLLPYT SKDSELPSGP ATVSTKLQEN VSNSHCENNS NQNNLLEEMS LYMENMNYLY 600 LNDDLTCDFQ VDSGTLACVA CGILGYPFMS VVQPSDGATM ELLSADHLSI QGPTVLEPKN 660 AHSCPGLNHP VEDSISDNVN HVADLSQPYK DVPATSITKF SEGWDTSNKY LRPRIFCLQH 720 AVQVEELLQS KGGAKILVIC HSDYQKIKAH AVPLAEDIGI PFNYNDVPLD AASQEDLNLI 780 SFAIDDEHDE IGEDWTSKLG VNLRFCVKVR KNSPFKQVQH ALPLSGLFSD KCSSSELFNI 840 NWRSRKSRSK GKLNHPSAPS KPCESVEMKV DKKLAEKIDG NITKNEPKII QYSRRKKGKP 900 DYSTGAGEGL ELLKDDPPRE DSSAACQLLD EHGGNKSKIK FKSESAILFS SLSTKSSQAQ 960 LEIQNTIVVE VVQKDQSKVL KESDGEACSL TAFASSQKQC EIKIMQRASE NDEMSPSNEC 1020 SKCCLVAADE RFVENTATVS EICNPVSEGQ FEELAARYDL INLSNLAILH SAQPSAGRFD 1080 PGLEDITVEK SCMNEGICSC MTSDNKMQQE TEAASRNNNE GILGHNKVIN KTNLGSKDFS 1140 SGVSLGNEMQ HKTNTGSGSQ FEPFFSSPTL TKGPSTITVG HRSEVPTEPC AAADSCDGAI 1200 SKNKAQKQEI LINASKEELL CGSIMPMEFD RPTSLSVEEN SVISKNPCAK KDPHADVTFN 1260 VEELQEIGAT KGTSGDEVIA CSHLPIKDKQ PTPIVMEACS EVQRESSSQK KSCTDATADD 1320 GRHENDIRNE RNEEESVSCC VTPINQTTIP IQKYSRTHRE SHATVNVDVD VDGEVCSSVD 1380 YRDLQSAVTN CRSSAMNGRK RKRELEEASE KDGDNGFIRS PCEGLRPRAQ KDATSSVNEG 1440 KISQEVLPTE ETRKPSIHTQ SKKVIKKGSH RCDLEGCHMN FGTKEELRLH KRNRCPYEGC 1500 GKKFRSHKYA ILHQRVHEDD RPLKCPWKGC SMSFKWAWAR TEHIRVHTGE RPYQCKVEGC 1560 GLSFRFVSDF SRHRRKTGHY MDFSA

Sequence ? help Back to Top

Protein Sequence Length: 1585 aa Download sequence

MGNLEIPKWL KRLPLAPEFR PTDTEFADPI AYISKIEKEV GAYGICKIIP PLPKPSKKYV  60
FDNLNRSLSK CPELGSGVDV SKNVGSVLSS GDTGVDEGEG RAVFTTRHQE LGQSGKRMKG  120
VASTPQFGVQ KQVWQSGEIY TLEQFESKSK TFAKNLLGVL KEVSPLHIEA LFWKVASEKP  180
IYVEYANDVP GSGFGEPEGQ FQYFHRRRRK RMSYRREISD CKKDQIHTVK NSHIDEIKNS  240
SVKSDPDTCL ETPKSSTSLS TMASDGNSHS KQKSGNASND IEGTAGWKLS NSPWNLQVIA  300
RSAGSLTRFM PDDIPGVTSP MVYIGMLFSW FAWHVEDHEL HSMNFLHTGS SKTWYAVPGD  360
YAFSFEEVIR TEAYGGNIDR LVSLLPAALS LLGEKTTLLS PELIVASGIP CCRLIQNPGE  420
FVVTFPRAYH VGFSHGFNCG EAANFGTPQW LQVAKEAAVR RAAMNYLPML SHQQLLYLLT  480
MSFVSRVPRS FLPGARSSRL RDRRKEEREV LVKKAFIEDL LTENKLLSVL LKRGSTYRAI  540
IWDPDLLPYT SKDSELPSGP ATVSTKLQEN VSNSHCENNS NQNNLLEEMS LYMENMNYLY  600
LNDDLTCDFQ VDSGTLACVA CGILGYPFMS VVQPSDGATM ELLSADHLSI QGPTVLEPKN  660
AHSCPGLNHP VEDSISDNVN HVADLSQPYK DVPATSITKF SEGWDTSNKY LRPRIFCLQH  720
AVQVEELLQS KGGAKILVIC HSDYQKIKAH AVPLAEDIGI PFNYNDVPLD AASQEDLNLI  780
SFAIDDEHDE IGEDWTSKLG VNLRFCVKVR KNSPFKQVQH ALPLSGLFSD KCSSSELFNI  840
NWRSRKSRSK GKLNHPSAPS KPCESVEMKV DKKLAEKIDG NITKNEPKII QYSRRKKGKP  900
DYSTGAGEGL ELLKDDPPRE DSSAACQLLD EHGGNKSKIK FKSESAILFS SLSTKSSQAQ  960
LEIQNTIVVE VVQKDQSKVL KESDGEACSL TAFASSQKQC EIKIMQRASE NDEMSPSNEC  1020
SKCCLVAADE RFVENTATVS EICNPVSEGQ FEELAARYDL INLSNLAILH SAQPSAGRFD  1080
PGLEDITVEK SCMNEGICSC MTSDNKMQQE TEAASRNNNE GILGHNKVIN KTNLGSKDFS  1140
SGVSLGNEMQ HKTNTGSGSQ FEPFFSSPTL TKGPSTITVG HRSEVPTEPC AAADSCDGAI  1200
SKNKAQKQEI LINASKEELL CGSIMPMEFD RPTSLSVEEN SVISKNPCAK KDPHADVTFN  1260
VEELQEIGAT KGTSGDEVIA CSHLPIKDKQ PTPIVMEACS EVQRESSSQK KSCTDATADD  1320
GRHENDIRNE RNEEESVSCC VTPINQTTIP IQKYSRTHRE SHATVNVDVD VDGEVCSSVD  1380
YRDLQSAVTN CRSSAMNGRK RKRELEEASE KDGDNGFIRS PCEGLRPRAQ KDATSSVNEG  1440
KISQEVLPTE ETRKPSIHTQ SKKVIKKGSH RCDLEGCHMN FGTKEELRLH KRNRCPYEGC  1500
GKKFRSHKYA ILHQRVHEDD RPLKCPWKGC SMSFKWAWAR TEHIRVHTGE RPYQCKVEGC  1560
GLSFRFVSDF SRHRRKTGHY MDFSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	0.0	C2H2 family protein