PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022765314.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family AP2
Protein Properties Length: 491aa    MW: 54328.5 Da    PI: 8.2571
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022765314.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.46.2e-17165214155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  XP_022765314.1 165 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 214
                     78*******************......55************************997 PP

2AP239.91e-12257307155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV+ +k  grW+A+       g    +k+++lg f+++ eAa+a++ a+ k +g
  XP_022765314.1 257 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAARAYDMAAMKCNG 307
                     89********.7******...5...334336**********99**********99776 PP

Sequence ? help Back to Top
Protein Sequence    Length: 491 aa     Download sequence    
MLDLNLDIVS SESSCDENNK MFDKLLPEAV TTLTQMEDSG STNSSIINAE DVPSNAGDEN  60
SSNNGSAFIF DILKKETDDT SMTINAKRVE NPSPDFVTRQ LFQFTGEKDC LELEFGSSAL  120
GTKSLARPRW LNLSYAESSG VAELKTVQLK PQSRKSRRGP RSRSSQYRGV TFYRRTGRWE  180
SHIWDCGKQV YLGGFDTAHA AARAYDRAAI KFRGVDADIN FNLSDYEEDM KQMKHMSKEE  240
FVHILRRQST GFSRGSSKYR GVTLHKCGRW EARMGQLLGK KYIYLGLFDS EVEAARAYDM  300
AAMKCNGREA VTNFEPSTYK GEITYSGGNC HNLDLSLGIS TPSVVQNRSN KGGDLHFRLA  360
ASAGERPMFE SSATTSVGVQ PQHYQTIASK QPPISSGVYP FLFPNNEERA MEKRAEAVSS  420
TRFSNWAWQM QGNGKIAPVP VFPIAASSGF SSSSATASSN TFLLNNSVQS VCFLTPPTAT  480
NSHSPYNSYR S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.31e-101AP2 family protein