PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022765313.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family AP2
Protein Properties Length: 408aa    MW: 45424 Da    PI: 7.999
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022765313.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.84.8e-17165214155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  XP_022765313.1 165 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 214
                     78*******************......55************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    
MLDLNLDIVS SESSCDENNK MFDKLLPEAV TTLTQMEDSG STNSSIINAE DVPSNAGDEN  60
SSNNGSAFIF DILKKETDDT SMTINAKRVE NPSPDFVTRQ LFQFTGEKDC LELEFGSSAL  120
GTKSLARPRW LNLSYAESSG VAELKTVQLK PQSRKSRRGP RSRSSQYRGV TFYRRTGRWE  180
SHIWDCGKQV YLGGFDTAHA AARAYDRAAI KFRGVDADIN FNLSDYEEDM KQMKHMSKEE  240
FVHILRRQST GFSRGSSKYR GVTLHKCGRW EARMGQLLGK KAYDMAAMKC NGREAVTNFE  300
PSTYKGEITY SGGNCHNLDL SLGISTPSVV QNRSNKGGDL HFRLAASAGE RPMFESSATT  360
SVGVQPQHYQ TIASKQPPIS SGVYPFLFPN NEVLCFISLA LCFLFLQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.28e-88AP2 family protein