PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022764935.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | GRAS | ||||||||
Protein Properties | Length: 475aa MW: 53515.7 Da PI: 5.7775 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 453.3 | 1.6e-138 | 48 | 474 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l++lL++cA++v++g+le+a+ L+++s+laspdgd+mqR+aayfteALa r+++ +++l kal++++ s ++see+ ++klf+e++P+lk+++ XP_022764935.1 48 LIHLLVACANHVAAGSLENANFGLEQISHLASPDGDTMQRIAAYFTEALADRMLKAWPGLHKALNSTKIS--SVSEEILVQKLFFELCPFLKIAY 140 689*************************************************************999998..6********************** PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190 +++NqaI ea+ege++vHiiD++ +++QW++L+q+++ Rpegpp+lRiTg+++ +ke le+++ L++ Ae+l++pf+fn+ ++ +le+l+ XP_022764935.1 141 VITNQAIIEAMEGEKMVHIIDLNSCEPAQWINLFQTFSVRPEGPPHLRITGIHE----QKEVLEQMALWLTEEAEKLDIPFQFNP-IVCKLENLD 230 ******************************************************....9**************************.5788***** PP GRAS 191 leeLrvkpgEalaVnlvlqlhrll...........................................................desvsles..er 224 le+Lrvk+gEalaV++vlqlh+ll ++++sl+ + XP_022764935.1 231 LESLRVKTGEALAVSSVLQLHSLLatddemrrrnnnspslsknlnsnqshrilqmnqrtlgewlekepvhiyspssdlatpspSSPLSLAPapKM 325 *********************************************************************************99666666555578 PP GRAS 225 devLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerl 319 ++L +++ lsPk++vv+eqe++hn+++++er++eal++y+alfd+le++++r++ er+kvE++l+g+ei+n++aceg er+erhe+l kW rl XP_022764935.1 326 GSFLTALRALSPKLMVVTEQESNHNGPTLMERVMEALNFYAALFDCLESTVSRAQLERQKVEKMLFGEEIKNIIACEGLERKERHEKLDKWILRL 420 89********************************************************************************************* PP GRAS 320 eeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 e aGF +vpls++ + qa +ll++ + dgy+++ee+g+lv++W++rpL+s+SaW XP_022764935.1 421 ELAGFVKVPLSYHGMLQAGRLLQTNNYDGYNIKEENGCLVMCWQERPLYSMSAW 474 ****************************************************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 475 aa Download sequence |
MAGMIQEGRT SVTSSPLQFF PWMSLSPGLG SPFPWLRELK SEERGLCLIH LLVACANHVA 60 AGSLENANFG LEQISHLASP DGDTMQRIAA YFTEALADRM LKAWPGLHKA LNSTKISSVS 120 EEILVQKLFF ELCPFLKIAY VITNQAIIEA MEGEKMVHII DLNSCEPAQW INLFQTFSVR 180 PEGPPHLRIT GIHEQKEVLE QMALWLTEEA EKLDIPFQFN PIVCKLENLD LESLRVKTGE 240 ALAVSSVLQL HSLLATDDEM RRRNNNSPSL SKNLNSNQSH RILQMNQRTL GEWLEKEPVH 300 IYSPSSDLAT PSPSSPLSLA PAPKMGSFLT ALRALSPKLM VVTEQESNHN GPTLMERVME 360 ALNFYAALFD CLESTVSRAQ LERQKVEKML FGEEIKNIIA CEGLERKERH EKLDKWILRL 420 ELAGFVKVPL SYHGMLQAGR LLQTNNYDGY NIKEENGCLV MCWQERPLYS MSAWG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50420.1 | 0.0 | GRAS family protein |