PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022764934.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 475aa    MW: 53515.7 Da    PI: 5.7775
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022764934.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS453.31.6e-138484741373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA++v++g+le+a+  L+++s+laspdgd+mqR+aayfteALa r+++ +++l kal++++ s  ++see+ ++klf+e++P+lk+++
  XP_022764934.1  48 LIHLLVACANHVAAGSLENANFGLEQISHLASPDGDTMQRIAAYFTEALADRMLKAWPGLHKALNSTKIS--SVSEEILVQKLFFELCPFLKIAY 140
                     689*************************************************************999998..6********************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +++NqaI ea+ege++vHiiD++  +++QW++L+q+++ Rpegpp+lRiTg+++    +ke le+++  L++ Ae+l++pf+fn+ ++ +le+l+
  XP_022764934.1 141 VITNQAIIEAMEGEKMVHIIDLNSCEPAQWINLFQTFSVRPEGPPHLRITGIHE----QKEVLEQMALWLTEEAEKLDIPFQFNP-IVCKLENLD 230
                     ******************************************************....9**************************.5788***** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrll...........................................................desvsles..er 224
                     le+Lrvk+gEalaV++vlqlh+ll                                                           ++++sl+   + 
  XP_022764934.1 231 LESLRVKTGEALAVSSVLQLHSLLatddemrrrnnnspslsknlnsnqshrilqmnqrtlgewlekepvhiyspssdlatpspSSPLSLAPapKM 325
                     *********************************************************************************99666666555578 PP

            GRAS 225 devLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerl 319
                      ++L +++ lsPk++vv+eqe++hn+++++er++eal++y+alfd+le++++r++ er+kvE++l+g+ei+n++aceg er+erhe+l kW  rl
  XP_022764934.1 326 GSFLTALRALSPKLMVVTEQESNHNGPTLMERVMEALNFYAALFDCLESTVSRAQLERQKVEKMLFGEEIKNIIACEGLERKERHEKLDKWILRL 420
                     89********************************************************************************************* PP

            GRAS 320 eeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     e aGF +vpls++ + qa +ll++ + dgy+++ee+g+lv++W++rpL+s+SaW
  XP_022764934.1 421 ELAGFVKVPLSYHGMLQAGRLLQTNNYDGYNIKEENGCLVMCWQERPLYSMSAW 474
                     ****************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    
MAGMIQEGRT SVTSSPLQFF PWMSLSPGLG SPFPWLRELK SEERGLCLIH LLVACANHVA  60
AGSLENANFG LEQISHLASP DGDTMQRIAA YFTEALADRM LKAWPGLHKA LNSTKISSVS  120
EEILVQKLFF ELCPFLKIAY VITNQAIIEA MEGEKMVHII DLNSCEPAQW INLFQTFSVR  180
PEGPPHLRIT GIHEQKEVLE QMALWLTEEA EKLDIPFQFN PIVCKLENLD LESLRVKTGE  240
ALAVSSVLQL HSLLATDDEM RRRNNNSPSL SKNLNSNQSH RILQMNQRTL GEWLEKEPVH  300
IYSPSSDLAT PSPSSPLSLA PAPKMGSFLT ALRALSPKLM VVTEQESNHN GPTLMERVME  360
ALNFYAALFD CLESTVSRAQ LERQKVEKML FGEEIKNIIA CEGLERKERH EKLDKWILRL  420
ELAGFVKVPL SYHGMLQAGR LLQTNNYDGY NIKEENGCLV MCWQERPLYS MSAWG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein