PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022764673.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 358aa MW: 40923 Da PI: 6.0287

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022764673.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.6	4.7e-16	63	122	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n+ k+ ++++lg ++++e Aa+ ++ a++k++g XP_022764673.1 63 SIYRGVTRHRWTGRFEAHLWDkSSWNNiqnKKgRQVYLGAYDSEEAAARTYDLAALKYWG 122 57*****************777799977447***********************98 PP
2	AP2	51.5	2.6e-16	165	217	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 s+y+GV +++ +grW+A+I + g +k+ +lg + t eeAa+a++ a+++++g+ XP_022764673.1 165 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGIYNTQEEAAAAYDMAALEYRGA 217 89**99******99966...3.6************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MKRSPTSSSS SSASPSSSSS SSESPQNVSE KPKAKRPRKH QNSDQKCCLN ATANSPNSGR 60 RSSIYRGVTR HRWTGRFEAH LWDKSSWNNI QNKKGRQVYL GAYDSEEAAA RTYDLAALKY 120 WGPETTLNFS IERYEKEIEE MKKVSKEEYL ASLRRRSSGF SRGVSKYRGV ARHHHNGRWE 180 ARIGRVFGNK YLYLGIYNTQ EEAAAAYDMA ALEYRGANAV TNFDISHYID RLKQKGILFL 240 DQTQEQIPDL PEAQRAEAEV EPKQGEEETD KHQHFQYMQM QLPICTDNAT MVGMETTDSN 300 ELAWSFYMDS GLTPFWDSDF GLERTDELPN LFNHDTGFED NIDLIFGIGP NESEENQE

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MKRSPTSSSS SSASPSSSSS SSESPQNVSE KPKAKRPRKH QNSDQKCCLN ATANSPNSGR  60
RSSIYRGVTR HRWTGRFEAH LWDKSSWNNI QNKKGRQVYL GAYDSEEAAA RTYDLAALKY  120
WGPETTLNFS IERYEKEIEE MKKVSKEEYL ASLRRRSSGF SRGVSKYRGV ARHHHNGRWE  180
ARIGRVFGNK YLYLGIYNTQ EEAAAAYDMA ALEYRGANAV TNFDISHYID RLKQKGILFL  240
DQTQEQIPDL PEAQRAEAEV EPKQGEEETD KHQHFQYMQM QLPICTDNAT MVGMETTDSN  300
ELAWSFYMDS GLTPFWDSDF GLERTDELPN LFNHDTGFED NIDLIFGIGP NESEENQE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	1e-117	AP2 family protein