PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022764639.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 655aa MW: 72721.5 Da PI: 8.3207

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022764639.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.1	0.00029	77	98	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +C + F ++ n++rHir+H XP_022764639.1 77 KCDKCLREFCSPINYRRHIRVH 98 7********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 655 aa Download sequence
MSVAKLKAAN SADVMKSEEP NDSLDTFIRQ AIGKEPFLSF SRAADSPFQW IQLLHALDQQ 60 DHPGWPLLTP LKVQMQKCDK CLREFCSPIN YRRHIRVHHR LKKLDKDSAK NRDLLAAFWD 120 KLSEEEVKEI ISFKDVSLEE VPGSSVIKSL TTLVKRPGFL PQVCLRAGSA LLDIVQARPS 180 RFPISSQELF SILDDASERT FLCGTAVSMQ KYIFDGEAGK IGLETKNLVA CTCFLVEQKL 240 VKAWLADKDA EALRCQKLLV EEEEAAQKRQ VELVERKRQK KLRQKEQKAK EQRHGEMEED 300 QVLPSEEPIH FSNPEEDADD EIQMGFSNGY CDPGTSQNVA RRIEQVGGYR HIGVTRWQIP 360 PKSQRGALNG FHSSQNSHGF KFGGMNKHGT NRERAAAIGS SNKIWSRKPK AVNDGKSLKT 420 GAEKQAANQL DQNKNLEVLI GSISVTLGNC SHQEGNNLAE ARDRSLVECQ IPNKNKVKEM 480 SSKLDPVQGV TNRSTIKFWR PVSQYGSKSS LQIQIGVREF EVEAIAEKDG VQASSDESCL 540 RSCATDGSNG VVSMNISTLE ESVEAGSLQF DSHAAKAFLG QRWKEAIAGE HVTLVLPPNL 600 EPPGCSEVEL DSSEKWTVKA GAFEASTGGV AKGKLRTKPE KGAKIKYIPK QRSAT

Sequence ? help Back to Top

Protein Sequence Length: 655 aa Download sequence

MSVAKLKAAN SADVMKSEEP NDSLDTFIRQ AIGKEPFLSF SRAADSPFQW IQLLHALDQQ  60
DHPGWPLLTP LKVQMQKCDK CLREFCSPIN YRRHIRVHHR LKKLDKDSAK NRDLLAAFWD  120
KLSEEEVKEI ISFKDVSLEE VPGSSVIKSL TTLVKRPGFL PQVCLRAGSA LLDIVQARPS  180
RFPISSQELF SILDDASERT FLCGTAVSMQ KYIFDGEAGK IGLETKNLVA CTCFLVEQKL  240
VKAWLADKDA EALRCQKLLV EEEEAAQKRQ VELVERKRQK KLRQKEQKAK EQRHGEMEED  300
QVLPSEEPIH FSNPEEDADD EIQMGFSNGY CDPGTSQNVA RRIEQVGGYR HIGVTRWQIP  360
PKSQRGALNG FHSSQNSHGF KFGGMNKHGT NRERAAAIGS SNKIWSRKPK AVNDGKSLKT  420
GAEKQAANQL DQNKNLEVLI GSISVTLGNC SHQEGNNLAE ARDRSLVECQ IPNKNKVKEM  480
SSKLDPVQGV TNRSTIKFWR PVSQYGSKSS LQIQIGVREF EVEAIAEKDG VQASSDESCL  540
RSCATDGSNG VVSMNISTLE ESVEAGSLQF DSHAAKAFLG QRWKEAIAGE HVTLVLPPNL  600
EPPGCSEVEL DSSEKWTVKA GAFEASTGGV AKGKLRTKPE KGAKIKYIPK QRSAT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	275	282	ERKRQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-159	C2H2 family protein