PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022764629.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 676aa MW: 74964.7 Da PI: 7.3001

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022764629.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13	0.0003	63	84	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +C + F ++ n++rHir+H XP_022764629.1 63 KCDKCLREFCSPINYRRHIRVH 84 7********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 676 aa Download sequence
MKSEEPNDSL DTFIRQAIGK EPFLSFSRAA DSPFQWIQLL HALDQQDHPG WPLLTPLKVQ 60 MQKCDKCLRE FCSPINYRRH IRVHHRLKKL DKDSAKNRDL LAAFWDKLSE EEVKEIISFK 120 DVSLEEVPGS SVIKSLTTLV KRPGFLPQVC LRAGSALLDI VQARPSRFPI SSQELFSILD 180 DASERTFLCG TAVSMQKYIF DGEAGKIGLE TKNLVACTCF LVEQKLVKAW LADKDAEALR 240 CQKLLVEEEE AAQKRQVELV ERKRQKKLRQ KEQKAKEQRH GEMEEGKENM DDSLEVNSPA 300 ETSSSLAAFD CDGQNPVMST DQVLPSEEPI HFSNPEEDAD DEIQMGFSNG YCDPGTSQNV 360 ARRIEQVGGY RHIGVTRWQI PPKSQRGALN GFHSSQNSHG FKFGGMNKHG TNRERAAAIG 420 SSNKIWSRKP KAVNDGKSLK TGAEKQAANQ LDQNKNLEVL IGSISVTLGN CSHQEGNNLA 480 EARDRSLVEC QIPNKNKVKE MSSKLDPVQG VTNRSTIKFW RPVSQYGSKS SLQIQIGVRE 540 FEVEAIAEKD GVQASSDESC LRSCATDGSN GVVSMNISTL EESVEAGSLQ FDSHAAKAFL 600 GQRWKEAIAG EHVTLVLPPN LEPPGCSEVE LDSSEKWTVK AGAFEASTGG VAKGKLRTKP 660 EKGAKIKYIP KQRSAT

Sequence ? help Back to Top

Protein Sequence Length: 676 aa Download sequence

MKSEEPNDSL DTFIRQAIGK EPFLSFSRAA DSPFQWIQLL HALDQQDHPG WPLLTPLKVQ  60
MQKCDKCLRE FCSPINYRRH IRVHHRLKKL DKDSAKNRDL LAAFWDKLSE EEVKEIISFK  120
DVSLEEVPGS SVIKSLTTLV KRPGFLPQVC LRAGSALLDI VQARPSRFPI SSQELFSILD  180
DASERTFLCG TAVSMQKYIF DGEAGKIGLE TKNLVACTCF LVEQKLVKAW LADKDAEALR  240
CQKLLVEEEE AAQKRQVELV ERKRQKKLRQ KEQKAKEQRH GEMEEGKENM DDSLEVNSPA  300
ETSSSLAAFD CDGQNPVMST DQVLPSEEPI HFSNPEEDAD DEIQMGFSNG YCDPGTSQNV  360
ARRIEQVGGY RHIGVTRWQI PPKSQRGALN GFHSSQNSHG FKFGGMNKHG TNRERAAAIG  420
SSNKIWSRKP KAVNDGKSLK TGAEKQAANQ LDQNKNLEVL IGSISVTLGN CSHQEGNNLA  480
EARDRSLVEC QIPNKNKVKE MSSKLDPVQG VTNRSTIKFW RPVSQYGSKS SLQIQIGVRE  540
FEVEAIAEKD GVQASSDESC LRSCATDGSN GVVSMNISTL EESVEAGSLQ FDSHAAKAFL  600
GQRWKEAIAG EHVTLVLPPN LEPPGCSEVE LDSSEKWTVK AGAFEASTGG VAKGKLRTKP  660
EKGAKIKYIP KQRSAT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	261	268	ERKRQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-163	C2H2 family protein