PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022764605.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 690aa MW: 76351.3 Da PI: 7.4697

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022764605.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13	0.00031	77	98	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +C + F ++ n++rHir+H XP_022764605.1 77 KCDKCLREFCSPINYRRHIRVH 98 7********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MSVAKLKAAN SADVMKSEEP NDSLDTFIRQ AIGKEPFLSF SRAADSPFQW IQLLHALDQQ 60 DHPGWPLLTP LKVQMQKCDK CLREFCSPIN YRRHIRVHHR LKKLDKDSAK NRDLLAAFWD 120 KLSEEEVKEI ISFKDVSLEE VPGSSVIKSL TTLVKRPGFL PQVCLRAGSA LLDIVQARPS 180 RFPISSQELF SILDDASERT FLCGTAVSMQ KYIFDGEAGK IGLETKNLVA CTCFLVEQKL 240 VKAWLADKDA EALRCQKLLV EEEEAAQKRQ VELVERKRQK KLRQKEQKAK EQRHGEMEEG 300 KENMDDSLEV NSPAETSSSL AAFDCDGQNP VMSTDQVLPS EEPIHFSNPE EDADDEIQMG 360 FSNGYCDPGT SQNVARRIEQ VGGYRHIGVT RWQIPPKSQR GALNGFHSSQ NSHGFKFGGM 420 NKHGTNRERA AAIGSSNKIW SRKPKAVNDG KSLKTGAEKQ AANQLDQNKN LEVLIGSISV 480 TLGNCSHQEG NNLAEARDRS LVECQIPNKN KVKEMSSKLD PVQGVTNRST IKFWRPVSQY 540 GSKSSLQIQI GVREFEVEAI AEKDGVQASS DESCLRSCAT DGSNGVVSMN ISTLEESVEA 600 GSLQFDSHAA KAFLGQRWKE AIAGEHVTLV LPPNLEPPGC SEVELDSSEK WTVKAGAFEA 660 STGGVAKGKL RTKPEKGAKI KYIPKQRSAT

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MSVAKLKAAN SADVMKSEEP NDSLDTFIRQ AIGKEPFLSF SRAADSPFQW IQLLHALDQQ  60
DHPGWPLLTP LKVQMQKCDK CLREFCSPIN YRRHIRVHHR LKKLDKDSAK NRDLLAAFWD  120
KLSEEEVKEI ISFKDVSLEE VPGSSVIKSL TTLVKRPGFL PQVCLRAGSA LLDIVQARPS  180
RFPISSQELF SILDDASERT FLCGTAVSMQ KYIFDGEAGK IGLETKNLVA CTCFLVEQKL  240
VKAWLADKDA EALRCQKLLV EEEEAAQKRQ VELVERKRQK KLRQKEQKAK EQRHGEMEEG  300
KENMDDSLEV NSPAETSSSL AAFDCDGQNP VMSTDQVLPS EEPIHFSNPE EDADDEIQMG  360
FSNGYCDPGT SQNVARRIEQ VGGYRHIGVT RWQIPPKSQR GALNGFHSSQ NSHGFKFGGM  420
NKHGTNRERA AAIGSSNKIW SRKPKAVNDG KSLKTGAEKQ AANQLDQNKN LEVLIGSISV  480
TLGNCSHQEG NNLAEARDRS LVECQIPNKN KVKEMSSKLD PVQGVTNRST IKFWRPVSQY  540
GSKSSLQIQI GVREFEVEAI AEKDGVQASS DESCLRSCAT DGSNGVVSMN ISTLEESVEA  600
GSLQFDSHAA KAFLGQRWKE AIAGEHVTLV LPPNLEPPGC SEVELDSSEK WTVKAGAFEA  660
STGGVAKGKL RTKPEKGAKI KYIPKQRSAT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	275	282	ERKRQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-163	C2H2 family protein