PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022764605.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 690aa MW: 76351.3 Da PI: 7.4697 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13 | 0.00031 | 77 | 98 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +C + F ++ n++rHir+H XP_022764605.1 77 KCDKCLREFCSPINYRRHIRVH 98 7********************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 690 aa Download sequence |
MSVAKLKAAN SADVMKSEEP NDSLDTFIRQ AIGKEPFLSF SRAADSPFQW IQLLHALDQQ 60 DHPGWPLLTP LKVQMQKCDK CLREFCSPIN YRRHIRVHHR LKKLDKDSAK NRDLLAAFWD 120 KLSEEEVKEI ISFKDVSLEE VPGSSVIKSL TTLVKRPGFL PQVCLRAGSA LLDIVQARPS 180 RFPISSQELF SILDDASERT FLCGTAVSMQ KYIFDGEAGK IGLETKNLVA CTCFLVEQKL 240 VKAWLADKDA EALRCQKLLV EEEEAAQKRQ VELVERKRQK KLRQKEQKAK EQRHGEMEEG 300 KENMDDSLEV NSPAETSSSL AAFDCDGQNP VMSTDQVLPS EEPIHFSNPE EDADDEIQMG 360 FSNGYCDPGT SQNVARRIEQ VGGYRHIGVT RWQIPPKSQR GALNGFHSSQ NSHGFKFGGM 420 NKHGTNRERA AAIGSSNKIW SRKPKAVNDG KSLKTGAEKQ AANQLDQNKN LEVLIGSISV 480 TLGNCSHQEG NNLAEARDRS LVECQIPNKN KVKEMSSKLD PVQGVTNRST IKFWRPVSQY 540 GSKSSLQIQI GVREFEVEAI AEKDGVQASS DESCLRSCAT DGSNGVVSMN ISTLEESVEA 600 GSLQFDSHAA KAFLGQRWKE AIAGEHVTLV LPPNLEPPGC SEVELDSSEK WTVKAGAFEA 660 STGGVAKGKL RTKPEKGAKI KYIPKQRSAT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 275 | 282 | ERKRQKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25610.1 | 1e-163 | C2H2 family protein |