PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022764513.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 276aa MW: 31098.7 Da PI: 6.8369 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.6 | 0.00019 | 55 | 77 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H XP_022764513.1 55 YSCSFCRREFRSAQALGGHMNVH 77 99*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence |
MEQAQYWMWM RRRHGFLKSH FQVSVNSLAD SWEEKAFAED AAGSLGGCIW PPRSYSCSFC 60 RREFRSAQAL GGHMNVHRRD RARLKQSVCP NNEVVPHQNH NQNPEPKFPH ETDDLDHNPS 120 TVASSFSASR VSALSTHENF TTYSIVQEEH KAQLFGSDST AKRTLNNIII SSDSKPDAEK 180 SIKLVGEDSM CQHSDHDHVE TNLSVGLNSV FFQNRPTVTC GDEAINYKRP KIAVSTLPFL 240 VSKEQYSPLQ WQVLGIKPAA GSMEDLDLEL RLGVLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06070.1 | 3e-34 | C2H2 family protein |