PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022764377.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SRS

Protein Properties

Length: 281aa MW: 30058.5 Da PI: 8.1142

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022764377.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	186.1	1.4e-57	76	239	6	153
DUF702 6 asCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.........aeaaskrkrel......kskkqsa 85 + C+dCGn+akk+C ++RCRtCCksrgfdCathvkstWvpaakrr+r+ ++ ++ kr+r l +s++++a XP_022764377.1 76 KVCRDCGNRAKKECGYSRCRTCCKSRGFDCATHVKSTWVPAAKRRDRKVVVIGDEEGGVGGGdggggssgsSSCGGKRPRVLnsisngTSSSNAA 170 57*******************************************888877766655444677887765555567777665544443344444 PP DUF702 86 lsstklssaeskkeletss.lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 ++s + + +++++ + +++ lP +v+++avfrc++v++++dg +e+aYq++v+i+GhvfkG+LydqG++ XP_022764377.1 171 SKSLNFEAGTNHQDSRFKEsLPGHVRAPAVFRCIQVTTISDGVAEIAYQATVNISGHVFKGFLYDQGVD 239 44444444444444433326*********************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MFGLHNIFVI APPPSQQNQQ QPAPPPPPQQ ALNQDYNLAD TNLWTLKRGS TQEAPICQKK 60 YGVLNSVEDD DDGCFKVCRD CGNRAKKECG YSRCRTCCKS RGFDCATHVK STWVPAAKRR 120 DRKVVVIGDE EGGVGGGDGG GGSSGSSSCG GKRPRVLNSI SNGTSSSNAA SKSLNFEAGT 180 NHQDSRFKES LPGHVRAPAV FRCIQVTTIS DGVAEIAYQA TVNISGHVFK GFLYDQGVDV 240 KNAFPCISKM LFESSSSGRD RDRDSSSPIV DPPNTFAACG D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.1	1e-52	SRS family protein