PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022764330.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | FAR1 | ||||||||
Protein Properties | Length: 159aa MW: 18352.5 Da PI: 7.0846 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 72 | 1.4e-22 | 62 | 147 | 1 | 91 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YAk++GF v +++s++sk ++++++ ++ C+++g+++e++ ++r+ +++Cka+l++k+++dgkw v++l ++ nHel+p XP_022764330.1 62 SFYKNYAKNIGFAVATKASRRSKISRQFIDVKYACTRHGSKRESNAV-----NPRPCLKMDCKATLHIKRKQDGKWFVQNLIKDRNHELFP 147 5***************************************9997665.....9************************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MGMDLDLDSN DLQCGNENPV DCEEDVDHGN EIGNRDTFEC NDNIDKGPEI GMEFDSLQSA 60 YSFYKNYAKN IGFAVATKAS RRSKISRQFI DVKYACTRHG SKRESNAVNP RPCLKMDCKA 120 TLHIKRKQDG KWFVQNLIKD RNHELFPADS HFFPYHRRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76320.2 | 5e-36 | FAR1 family protein |