PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022764118.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | HB-other | ||||||||
Protein Properties | Length: 1742aa MW: 195004 Da PI: 5.0373 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59 | 7.6e-19 | 32 | 86 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++qle+Le+ +++++yps+++r+eL+ +lgL++rq ++WF+ rR k++k XP_022764118.1 32 KRKMKTASQLEILEKTYAMEMYPSEATRAELSVQLGLSDRQLQMWFCHRRLKDRK 86 89999************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1742 aa Download sequence |
METGGVSGGG GGVGGGSSEG EKKLPEGETK VKRKMKTASQ LEILEKTYAM EMYPSEATRA 60 ELSVQLGLSD RQLQMWFCHR RLKDRKGPSV KRQRKYSMSL AGEEMGGAEA GNEHGSGGFS 120 LLGHELDLRR AVPRTGMTVP RYYEVPRSIV ELELRAIAFV ELQLGEPIRD DGPMLGMEFD 180 PLPPGAFGAP IVASTEVQQK QPGQPFETKI YEQRDTKTVK GSMRAVREYQ FLPEQPTVRT 240 ETYERVAPSY NYGSPTDGPN AMATSLSGGR SSVHGNEQVP SGNGFPGQMP NLNLLPQQSR 300 QGHLLPTALG EYDNVSRKNS LANTAVDANI GAHPISALES PFVSSDRRVS LDEDVLRMER 360 KRKSEEARIA REIEAHEKRI RKELEKQDML RRKREEQIKK EMERHDRERR KEEERLLREK 420 QREEERYQRE QRRELERREK FLMKESVRAE RMRQKEELRK EKEAARLKAA NERAIARKLA 480 KESMEPIEDE RLELMELAVS SKGLPSTLSL DFEILENLDI FRDKLCEFPP KTVQLKRPFS 540 IQPWNGSEES IGNLLMVWRF LITFADVLGL WPFTLDELVQ AFHDYDPRLL GEIHIALLRS 600 IIKDIEDVAR TPSTGLGASQ NSAVNPGGGH PQIVEGAYAW GFDIRSWQCH LNMLTWPEIL 660 RQFALSAGFG PQLKKRNIDQ AYLCDENEGN DGEDIITNLR NGAAAENAVA IMQERGFSNP 720 RRSRHRLTPG TVKFAAFHVL SIEGSKGLTI LEVAEKIQKS GLRDLTTSKT PEASIAAALS 780 RDTKLFERTA PSTYCVRSPY RKEPADAEAI LSTARERIRV FKSGFIEGED AEGAEREEDS 840 ESDIAEDHEV DDLGAEINSK KEMHNSEGRS SFDTETVLGN GRESGEILGT QQVEVGNVCK 900 GVLSPHAGGL DKVKDIDASV EQSADATRIH KDATSAGLED TEIDESNTGE LWVQGLMEGD 960 YSDLSVEERL NALFALISVA IEGNTIHVVL EERLEAANAL KKQMWAEVQL DKRRVKDEFV 1020 FRANFSSYMG NKMENSLVMS SAECRRSPQI VGDKKDNDSS VGPVVPQECL NNPPNDHNYL 1080 NNVSSEGNMP MQDFSIGPDN FQYQQPGYAL ERSRSQLKFY IGHKAEEMYV FRSLPLGQDR 1140 RRNRYWRFIT STSCSDPGCG RIFVELLDGR WRLIDDEEGF DALLSSLDVR GIRESHLHAM 1200 LQKIEMSFKE AVGRYKLHVN KRQNGDTIKT EANEMASSLD WSVCFKSPSS TLCGSDSDMS 1260 ETSTSFSIDL GRNENEKNDA LKRYQDFEKW MWKERFNSLT FCAMKYGKRR CKQLLDCAEK 1320 LQMGPDFALD GSAFSPLRIR LIKLQLALIE VSIPFEALQP AWTEGYRNSW GMKLYSSTTA 1380 EELLQILTLL ESSIMRDSLS LKFETTCEVL SPSNPSGRFA NYSSDLEAVP VLPWIPKTTA 1440 AVALRLIEFD AAISYTLNQG SETQRDKGAG EFMKLPSKYA VVKNHQDDET MQTSNRVEYL 1500 QEASWVDVGI GFSGSGRGRG RGKGGVIRGG RSQRRPTSSR SGSGKTITNA DSGRSGPVLE 1560 WKSRSRGRGG HNRGRRSSRR PKVAKRMVEI AGGRENPKEI LGKSSRSSAA NAWNGDEVSR 1620 LEVGTADNPS SSERSEYNDE NGQATGDEYD YLAVDDYAVG FNVKADDGDG SDYNIDGDEG 1680 DEDDDVEDGY DIAEEEQGNF NVGGYINDNS DEGIRDADDL EDSDPYVKPY GYSTEASSDF 1740 SE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44180.1 | 0.0 | HB-other family protein |