PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022764115.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HB-other

Protein Properties

Length: 1779aa MW: 199299 Da PI: 5.0583

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022764115.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59	7.8e-19	32	86	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++qle+Le+ +++++yps+++r+eL+ +lgL++rq ++WF+ rR k++k XP_022764115.1 32 KRKMKTASQLEILEKTYAMEMYPSEATRAELSVQLGLSDRQLQMWFCHRRLKDRK 86 89999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1779 aa Download sequence
METGGVSGGG GGVGGGSSEG EKKLPEGETK VKRKMKTASQ LEILEKTYAM EMYPSEATRA 60 ELSVQLGLSD RQLQMWFCHR RLKDRKGPSV KRQRKYSMSL AGEEMGGAEA GNEHGSGGFS 120 LLGHELDLRR AVPRTGMTVP RYYEVPRSIV ELELRAIAFV ELQLGEPIRD DGPMLGMEFD 180 PLPPGAFGAP IASTEVQQKQ PGQPFETKIY EQRDTKTVKG SMRAVREYQF LPEQPTVRTE 240 TYERVAPSYN YGSPTDGPNA MATSLSGGRS SVHGNEQVPS GNGFPGQMPN LNLLPQQSRQ 300 GHLLPTALGE YDNVSRKNSL ANTAVDANIG AHPISALESP FVSSDRRVSL DEDVLRMERK 360 RKSEEARIAR EIEAHEKRIR KELEKQDMLR RKREEQIKKE MERHDRERRK EEERLLREKQ 420 REEERYQREQ RRELERREKF LMKESVRAER MRQKEELRKE KEAARLKAAN ERAIARKLAK 480 ESMEPIEDER LELMELAVSS KGLPSTLSLD FEILENLDIF RDKLCEFPPK TVQLKRPFSI 540 QPWNGSEESI GNLLMVWRFL ITFADVLGLW PFTLDELVQA FHDYDPRLLG EIHIALLRSI 600 IKDIEDVART PSTGLGASQN SAVNPGGGHP QIVEGAYAWG FDIRSWQCHL NMLTWPEILR 660 QFALSAGFGP QLKKRNIDQA YLCDENEGND GEDIITNLRN GAAAENAVAI MQERGFSNPR 720 RSRHRLTPGT VKFAAFHVLS IEGSKGLTIL EVAEKIQKSG LRDLTTSKTP EASIAAALSR 780 DTKLFERTAP STYCVRSPYR KEPADAEAIL STARERIRVF KSGFIEGEDA EGAEREEDSE 840 SDIAEDHEVD DLGAEINSKK EMHNSEGRSS FDTETVLGNG RESGEILGTQ QVEVGNVCKG 900 VLSPHAGGLD KVKDIDASVE QSADATRIHK DATSAGLEDT EIDESNTGEL WVQGLMEGDY 960 SDLSVEERLN ALFALISVAI EGNTIHVVLE ERLEAANALK KQMWAEVQLD KRRVKDEFVF 1020 RANFSSYMGN KMENSLVMSS AECRRSPQIV GDKKDNDSSV GPVVPQECLN NPPNDHNYLN 1080 NVSSEGNMPM QDFSIGPDNF QYQQPGYALE RSRSQLKFYI GHKAEEMYVF RSLPLGQDRR 1140 RNRYWRFITS TSCSDPGCGR IFVELLDGRW RLIDDEEGFD ALLSSLDVRG IRESHLHAML 1200 QKIEMSFKEA VGRYKLHVNK RQNGDTIKTE ANEMASSLDW SVCFKSPSST LCGSDSDMSE 1260 TSTSFSIDLG RNENEKNDAL KRYQDFEKWM WKERFNSLTF CAMKYGKRRC KQLLDVCDSC 1320 FSIYFYEYNH CPSCHMTYIA SKSTVIFSEH VAQCAEKLQM GPDFALDGSA FSPLRIRLIK 1380 LQLALIEVSI PFEALQPAWT EGYRNSWGMK LYSSTTAEEL LQILTLLESS IMRDSLSLKF 1440 ETTCEVLSPS NPSGRFANYS SDLEAVPVLP WIPKTTAAVA LRLIEFDAAI SYTLNQGSET 1500 QRDKGAGEFM KLPSKYAVVK NHQDDETMQT SNRVEYLQEA SWVDVGIGFS GSGRGRGRGK 1560 GGVIRGGRSQ RRPTSSRSGS GKTITNADSG RSGPVLEWKS RSRGRGGHNR GRRSSRRPKV 1620 AKRMVEIAGG RENPKEILGK SSRSSAANAW NGDEVSRLEV GTADNPSSSE RSEYNDENGQ 1680 ATGDEYDYLA VDDYAVGFNV KADDGDGSDY NIDGDEGDED DDVEDGYDIA EEEQGNFNVG 1740 GYINDNSDEG IRDADDLEDS DPYVKPYGYS TEASSDFSE

Sequence ? help Back to Top

Protein Sequence Length: 1779 aa Download sequence

METGGVSGGG GGVGGGSSEG EKKLPEGETK VKRKMKTASQ LEILEKTYAM EMYPSEATRA  60
ELSVQLGLSD RQLQMWFCHR RLKDRKGPSV KRQRKYSMSL AGEEMGGAEA GNEHGSGGFS  120
LLGHELDLRR AVPRTGMTVP RYYEVPRSIV ELELRAIAFV ELQLGEPIRD DGPMLGMEFD  180
PLPPGAFGAP IASTEVQQKQ PGQPFETKIY EQRDTKTVKG SMRAVREYQF LPEQPTVRTE  240
TYERVAPSYN YGSPTDGPNA MATSLSGGRS SVHGNEQVPS GNGFPGQMPN LNLLPQQSRQ  300
GHLLPTALGE YDNVSRKNSL ANTAVDANIG AHPISALESP FVSSDRRVSL DEDVLRMERK  360
RKSEEARIAR EIEAHEKRIR KELEKQDMLR RKREEQIKKE MERHDRERRK EEERLLREKQ  420
REEERYQREQ RRELERREKF LMKESVRAER MRQKEELRKE KEAARLKAAN ERAIARKLAK  480
ESMEPIEDER LELMELAVSS KGLPSTLSLD FEILENLDIF RDKLCEFPPK TVQLKRPFSI  540
QPWNGSEESI GNLLMVWRFL ITFADVLGLW PFTLDELVQA FHDYDPRLLG EIHIALLRSI  600
IKDIEDVART PSTGLGASQN SAVNPGGGHP QIVEGAYAWG FDIRSWQCHL NMLTWPEILR  660
QFALSAGFGP QLKKRNIDQA YLCDENEGND GEDIITNLRN GAAAENAVAI MQERGFSNPR  720
RSRHRLTPGT VKFAAFHVLS IEGSKGLTIL EVAEKIQKSG LRDLTTSKTP EASIAAALSR  780
DTKLFERTAP STYCVRSPYR KEPADAEAIL STARERIRVF KSGFIEGEDA EGAEREEDSE  840
SDIAEDHEVD DLGAEINSKK EMHNSEGRSS FDTETVLGNG RESGEILGTQ QVEVGNVCKG  900
VLSPHAGGLD KVKDIDASVE QSADATRIHK DATSAGLEDT EIDESNTGEL WVQGLMEGDY  960
SDLSVEERLN ALFALISVAI EGNTIHVVLE ERLEAANALK KQMWAEVQLD KRRVKDEFVF  1020
RANFSSYMGN KMENSLVMSS AECRRSPQIV GDKKDNDSSV GPVVPQECLN NPPNDHNYLN  1080
NVSSEGNMPM QDFSIGPDNF QYQQPGYALE RSRSQLKFYI GHKAEEMYVF RSLPLGQDRR  1140
RNRYWRFITS TSCSDPGCGR IFVELLDGRW RLIDDEEGFD ALLSSLDVRG IRESHLHAML  1200
QKIEMSFKEA VGRYKLHVNK RQNGDTIKTE ANEMASSLDW SVCFKSPSST LCGSDSDMSE  1260
TSTSFSIDLG RNENEKNDAL KRYQDFEKWM WKERFNSLTF CAMKYGKRRC KQLLDVCDSC  1320
FSIYFYEYNH CPSCHMTYIA SKSTVIFSEH VAQCAEKLQM GPDFALDGSA FSPLRIRLIK  1380
LQLALIEVSI PFEALQPAWT EGYRNSWGMK LYSSTTAEEL LQILTLLESS IMRDSLSLKF  1440
ETTCEVLSPS NPSGRFANYS SDLEAVPVLP WIPKTTAAVA LRLIEFDAAI SYTLNQGSET  1500
QRDKGAGEFM KLPSKYAVVK NHQDDETMQT SNRVEYLQEA SWVDVGIGFS GSGRGRGRGK  1560
GGVIRGGRSQ RRPTSSRSGS GKTITNADSG RSGPVLEWKS RSRGRGGHNR GRRSSRRPKV  1620
AKRMVEIAGG RENPKEILGK SSRSSAANAW NGDEVSRLEV GTADNPSSSE RSEYNDENGQ  1680
ATGDEYDYLA VDDYAVGFNV KADDGDGSDY NIDGDEGDED DDVEDGYDIA EEEQGNFNVG  1740
GYINDNSDEG IRDADDLEDS DPYVKPYGYS TEASSDFSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein