PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022764112.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HB-other

Protein Properties

Length: 1780aa MW: 199398 Da PI: 5.0583

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022764112.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59	7.8e-19	32	86	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++qle+Le+ +++++yps+++r+eL+ +lgL++rq ++WF+ rR k++k XP_022764112.1 32 KRKMKTASQLEILEKTYAMEMYPSEATRAELSVQLGLSDRQLQMWFCHRRLKDRK 86 89999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1780 aa Download sequence
METGGVSGGG GGVGGGSSEG EKKLPEGETK VKRKMKTASQ LEILEKTYAM EMYPSEATRA 60 ELSVQLGLSD RQLQMWFCHR RLKDRKGPSV KRQRKYSMSL AGEEMGGAEA GNEHGSGGFS 120 LLGHELDLRR AVPRTGMTVP RYYEVPRSIV ELELRAIAFV ELQLGEPIRD DGPMLGMEFD 180 PLPPGAFGAP IVASTEVQQK QPGQPFETKI YEQRDTKTVK GSMRAVREYQ FLPEQPTVRT 240 ETYERVAPSY NYGSPTDGPN AMATSLSGGR SSVHGNEQVP SGNGFPGQMP NLNLLPQQSR 300 QGHLLPTALG EYDNVSRKNS LANTAVDANI GAHPISALES PFVSSDRRVS LDEDVLRMER 360 KRKSEEARIA REIEAHEKRI RKELEKQDML RRKREEQIKK EMERHDRERR KEEERLLREK 420 QREEERYQRE QRRELERREK FLMKESVRAE RMRQKEELRK EKEAARLKAA NERAIARKLA 480 KESMEPIEDE RLELMELAVS SKGLPSTLSL DFEILENLDI FRDKLCEFPP KTVQLKRPFS 540 IQPWNGSEES IGNLLMVWRF LITFADVLGL WPFTLDELVQ AFHDYDPRLL GEIHIALLRS 600 IIKDIEDVAR TPSTGLGASQ NSAVNPGGGH PQIVEGAYAW GFDIRSWQCH LNMLTWPEIL 660 RQFALSAGFG PQLKKRNIDQ AYLCDENEGN DGEDIITNLR NGAAAENAVA IMQERGFSNP 720 RRSRHRLTPG TVKFAAFHVL SIEGSKGLTI LEVAEKIQKS GLRDLTTSKT PEASIAAALS 780 RDTKLFERTA PSTYCVRSPY RKEPADAEAI LSTARERIRV FKSGFIEGED AEGAEREEDS 840 ESDIAEDHEV DDLGAEINSK KEMHNSEGRS SFDTETVLGN GRESGEILGT QQVEVGNVCK 900 GVLSPHAGGL DKVKDIDASV EQSADATRIH KDATSAGLED TEIDESNTGE LWVQGLMEGD 960 YSDLSVEERL NALFALISVA IEGNTIHVVL EERLEAANAL KKQMWAEVQL DKRRVKDEFV 1020 FRANFSSYMG NKMENSLVMS SAECRRSPQI VGDKKDNDSS VGPVVPQECL NNPPNDHNYL 1080 NNVSSEGNMP MQDFSIGPDN FQYQQPGYAL ERSRSQLKFY IGHKAEEMYV FRSLPLGQDR 1140 RRNRYWRFIT STSCSDPGCG RIFVELLDGR WRLIDDEEGF DALLSSLDVR GIRESHLHAM 1200 LQKIEMSFKE AVGRYKLHVN KRQNGDTIKT EANEMASSLD WSVCFKSPSS TLCGSDSDMS 1260 ETSTSFSIDL GRNENEKNDA LKRYQDFEKW MWKERFNSLT FCAMKYGKRR CKQLLDVCDS 1320 CFSIYFYEYN HCPSCHMTYI ASKSTVIFSE HVAQCAEKLQ MGPDFALDGS AFSPLRIRLI 1380 KLQLALIEVS IPFEALQPAW TEGYRNSWGM KLYSSTTAEE LLQILTLLES SIMRDSLSLK 1440 FETTCEVLSP SNPSGRFANY SSDLEAVPVL PWIPKTTAAV ALRLIEFDAA ISYTLNQGSE 1500 TQRDKGAGEF MKLPSKYAVV KNHQDDETMQ TSNRVEYLQE ASWVDVGIGF SGSGRGRGRG 1560 KGGVIRGGRS QRRPTSSRSG SGKTITNADS GRSGPVLEWK SRSRGRGGHN RGRRSSRRPK 1620 VAKRMVEIAG GRENPKEILG KSSRSSAANA WNGDEVSRLE VGTADNPSSS ERSEYNDENG 1680 QATGDEYDYL AVDDYAVGFN VKADDGDGSD YNIDGDEGDE DDDVEDGYDI AEEEQGNFNV 1740 GGYINDNSDE GIRDADDLED SDPYVKPYGY STEASSDFSE

Sequence ? help Back to Top

Protein Sequence Length: 1780 aa Download sequence

METGGVSGGG GGVGGGSSEG EKKLPEGETK VKRKMKTASQ LEILEKTYAM EMYPSEATRA  60
ELSVQLGLSD RQLQMWFCHR RLKDRKGPSV KRQRKYSMSL AGEEMGGAEA GNEHGSGGFS  120
LLGHELDLRR AVPRTGMTVP RYYEVPRSIV ELELRAIAFV ELQLGEPIRD DGPMLGMEFD  180
PLPPGAFGAP IVASTEVQQK QPGQPFETKI YEQRDTKTVK GSMRAVREYQ FLPEQPTVRT  240
ETYERVAPSY NYGSPTDGPN AMATSLSGGR SSVHGNEQVP SGNGFPGQMP NLNLLPQQSR  300
QGHLLPTALG EYDNVSRKNS LANTAVDANI GAHPISALES PFVSSDRRVS LDEDVLRMER  360
KRKSEEARIA REIEAHEKRI RKELEKQDML RRKREEQIKK EMERHDRERR KEEERLLREK  420
QREEERYQRE QRRELERREK FLMKESVRAE RMRQKEELRK EKEAARLKAA NERAIARKLA  480
KESMEPIEDE RLELMELAVS SKGLPSTLSL DFEILENLDI FRDKLCEFPP KTVQLKRPFS  540
IQPWNGSEES IGNLLMVWRF LITFADVLGL WPFTLDELVQ AFHDYDPRLL GEIHIALLRS  600
IIKDIEDVAR TPSTGLGASQ NSAVNPGGGH PQIVEGAYAW GFDIRSWQCH LNMLTWPEIL  660
RQFALSAGFG PQLKKRNIDQ AYLCDENEGN DGEDIITNLR NGAAAENAVA IMQERGFSNP  720
RRSRHRLTPG TVKFAAFHVL SIEGSKGLTI LEVAEKIQKS GLRDLTTSKT PEASIAAALS  780
RDTKLFERTA PSTYCVRSPY RKEPADAEAI LSTARERIRV FKSGFIEGED AEGAEREEDS  840
ESDIAEDHEV DDLGAEINSK KEMHNSEGRS SFDTETVLGN GRESGEILGT QQVEVGNVCK  900
GVLSPHAGGL DKVKDIDASV EQSADATRIH KDATSAGLED TEIDESNTGE LWVQGLMEGD  960
YSDLSVEERL NALFALISVA IEGNTIHVVL EERLEAANAL KKQMWAEVQL DKRRVKDEFV  1020
FRANFSSYMG NKMENSLVMS SAECRRSPQI VGDKKDNDSS VGPVVPQECL NNPPNDHNYL  1080
NNVSSEGNMP MQDFSIGPDN FQYQQPGYAL ERSRSQLKFY IGHKAEEMYV FRSLPLGQDR  1140
RRNRYWRFIT STSCSDPGCG RIFVELLDGR WRLIDDEEGF DALLSSLDVR GIRESHLHAM  1200
LQKIEMSFKE AVGRYKLHVN KRQNGDTIKT EANEMASSLD WSVCFKSPSS TLCGSDSDMS  1260
ETSTSFSIDL GRNENEKNDA LKRYQDFEKW MWKERFNSLT FCAMKYGKRR CKQLLDVCDS  1320
CFSIYFYEYN HCPSCHMTYI ASKSTVIFSE HVAQCAEKLQ MGPDFALDGS AFSPLRIRLI  1380
KLQLALIEVS IPFEALQPAW TEGYRNSWGM KLYSSTTAEE LLQILTLLES SIMRDSLSLK  1440
FETTCEVLSP SNPSGRFANY SSDLEAVPVL PWIPKTTAAV ALRLIEFDAA ISYTLNQGSE  1500
TQRDKGAGEF MKLPSKYAVV KNHQDDETMQ TSNRVEYLQE ASWVDVGIGF SGSGRGRGRG  1560
KGGVIRGGRS QRRPTSSRSG SGKTITNADS GRSGPVLEWK SRSRGRGGHN RGRRSSRRPK  1620
VAKRMVEIAG GRENPKEILG KSSRSSAANA WNGDEVSRLE VGTADNPSSS ERSEYNDENG  1680
QATGDEYDYL AVDDYAVGFN VKADDGDGSD YNIDGDEGDE DDDVEDGYDI AEEEQGNFNV  1740
GGYINDNSDE GIRDADDLED SDPYVKPYGY STEASSDFSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein