PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022763636.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | GATA | ||||||||
Protein Properties | Length: 896aa MW: 96349.3 Da PI: 8.9842 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 48.8 | 9.4e-16 | 806 | 842 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg ++ Tp++Rrgp g++tLCnaCGl+++ kg+ XP_022763636.1 806 CTHCGISSkkTPMMRRGPAGPRTLCNACGLKWANKGV 842 *****88888************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 896 aa Download sequence |
MGSTFLSIPT KRAMPDPTAS SNGPSKRSKP PSTPLCIRPA HVAFRLLCHV SRVGGIIGKS 60 GSVIKQLQQV TGSKIRIEDA PAESPDRVIT VVGPSAVNTK IMLNIGSLGN GDDSRVEEID 120 VSKAQEALVR VFERILEVAA ESNGAALGMV SCRLLAEVKQ VGSVIGKGGK VVEKIREDTG 180 TKIRVLTDKL PACAGPTEEI VEIEGGVLAV KKALVAVSHR LQDCPPVNKT KVTENRTIES 240 VLPETLHRPI ELLPEETLHR PIDLLPKETL HRPIDLLPQE TLRRPIDLLP RETLRRPIEV 300 VPQDPLCRPI DVVPQEFFHR HIEVVSQEAL SDLHVDHLSQ RSSLVPSIPG SSISYATRAH 360 PLSLESEKAP PLDTKTMQQE VVFKILCPSG RVGGVIGKGG AIIKALQSDT GATITIGATI 420 TDCDERLITV TASENPESRY SPAQKAVVLV FVRAFEASIE KGLDSGSGKV SNVTTRVVVP 480 SSQVGCLLGK GGAIISEMRK ATGTIMRILG TDQVPKCVTE NDQVVQISGG YLNVRDAIYH 540 VTGRLRENLF STTLKSAGAK SSSLVLTETS PYERLLDATP FGLQVLSGVS HSLSRHTTLA 600 LNRMDPLGLS HSSDRPRSPG LWTSEQMATG LNPRNIVDIG RGLTSFRGGF ELCSGNKSAI 660 VTNTTVEIRV PENVIDSVYG ENGRNLARLR EVQEVLLLLG GYEIPSGIPA LGTVSVTQRG 720 MGDFPGRSIQ PQRAASLNRF REKRKERCFD KKIRYTVRKE VALRMQRKKG QFTSSKAISD 780 EVASASSGWS GAAGSGQDES MQEILCTHCG ISSKKTPMMR RGPAGPRTLC NACGLKWANK 840 GVLRDLSKVS TAANQDPTAK TTEQNDAEAS ESEGVTLTTD VVSLSNGDNS AVTAER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51600.2 | 5e-51 | GATA family protein |