PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022763463.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | HB-PHD | ||||||||
Protein Properties | Length: 935aa MW: 103405 Da PI: 5.3215 | ||||||||
Description | HB-PHD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 35.1 | 2.3e-11 | 859 | 900 | 11 | 52 |
HHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 11 qleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 ++L + F++++yp+++++e LAk+l++t qV+ WF N R XP_022763463.1 859 VKQRLYKSFKESQYPDRATKESLAKELEITFMQVSKWFDNAR 900 6789************************************99 PP | |||||||
2 | PHD | 40.9 | 4.8e-14 | 487 | 542 | 1 | 51 |
SBTTTSS..TCTTSSEEEBSS.SSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS PHD 1 rCkvCgk..sdeegelvlCdg.CkewfHlkClglkleseekpeg..ewlCeeCkek 51 +C+ Cg+ ++++++lCdg C++ fH++Cl+++l +e++p + wlC+eC++k XP_022763463.1 487 FCAKCGSkdLSANNDIILCDGaCDRGFHQYCLQPPLLKEDIPPDdeGWLCPECDCK 542 699***977677********66*******************99999*******985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 935 aa Download sequence |
MGISPSQAKS KKGNHFCPEE STSEQAHEFR SEYLLSELSE NKHQCGYAIT QNESAEIATV 60 ESRSSIREPS SEYVAKNSSP EYLGLLPKGV TNHNNTDKSF CPQETVSGKI HEYGFGYVHK 120 ETSENKIQSG SEIVHNKHEA SCTLVCGLPA KHLQPFSEDF SQNAITKSLG LLPEDSSKYT 180 QTDKLSCPQL GSAEPTVSFG SENICKVLSE PPEQGRQLDS ESLPNGIEKS TTAVSVNVFN 240 QALQLNPEDT NKGNCGKHLQ SPSEGVSNVI QTSKSSLVDP LALPQEFALE NPSIQQPRLH 300 CENMANNSGA EQHETTPKNL PNNSGRHRDG KTSKMIKKKY MLRSLTSNDR ILRSKSQEKS 360 KASESSNSLA DVGSSKQQKR RKRKRKRREK GEVVDEYSRI RAHLRYLLNR INYERSLIAA 420 YSTEGWKGLS LEKLKPEKEL QRATSEILRR KLKIRDLFQR IDSLCAEGRL PESLFDSEGQ 480 IDSEDIFCAK CGSKDLSANN DIILCDGACD RGFHQYCLQP PLLKEDIPPD DEGWLCPECD 540 CKVDCIELVN ESQGTSFSLT DNWEKVFPEA AVASGGQKQD PNFGLPSDDS DDNDYNPDSS 600 ETDEKDQENE LSFDESDFTS TSEELEVPAN VDPYLGLPSD DSEDDDYDPD GRDHDNVAKP 660 GSSSSDFTSD SEGLGAMLEY DSSSQKGEGP MSNSASKDSK GRKPKLGGKE SLNDELLSIM 720 ESATGLYGAV VSKKRSIERM DYKRLYDETY GNVPSSSSDD EDWSDTTAPR KRMKCTAEAA 780 TATAPANGNA SLSRSVSISD GLNPNPEETE HKPRRRTRQK SNFKGTDLSP AEFKGGASAS 840 GSSGKKAGSS TYRRLGEAVK QRLYKSFKES QYPDRATKES LAKELEITFM QVSKWFDNAR 900 WSFNNSSSIH ETAAKKVSKN DITLARPKKN RQIGI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 379 | 385 | KRRKRKR |
2 | 379 | 387 | KRRKRKRKR |
3 | 380 | 386 | KRRKRKR |
4 | 380 | 388 | KRRKRKRKR |
5 | 380 | 385 | RRKRKR |
6 | 380 | 386 | RRKRKRK |
7 | 380 | 389 | RRKRKRKRRE |
8 | 380 | 390 | RRKRKRKRREK |
9 | 381 | 387 | KRRKRKR |
10 | 381 | 386 | RKRKRK |
11 | 381 | 390 | RRKRKRKRRE |
12 | 381 | 391 | RRKRKRKRREK |
13 | 382 | 388 | KRRKRKR |
14 | 383 | 388 | RKRKRK |
15 | 383 | 393 | RRKRKRKRREK |
16 | 385 | 395 | RRKRKRKRREK |
17 | 815 | 821 | RRTRQKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19510.1 | 2e-91 | HB-PHD family protein |