PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022763177.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 1694aa    MW: 184448 Da    PI: 4.6872
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022763177.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.19.7e-0616711693225
                      -S---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH    2 ktelCrffartGtCkyGdrCkFaH 25  
                      +++ C+ f+++G+Ck G++C ++H
  XP_022763177.1 1671 GQRVCK-FHENGHCKKGASCDYMH 1693
                      6789**.9999************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 1694 aa     Download sequence    
MDAEEEEPLL VPNVESSLRL EGDALTTAAA SQIQHEKTES QQCELETVAE FDESEPPASS  60
AGFPVAEKKK EGDGKGVVDV EVVPEAAVGD EEGGEDLIFG EKKHEMLDAG DGIKASSPTD  120
GNEEGEDLAD RGESDVAEVE EKSDMVEDTT VDGVMEEMER ANVSNERGTA EGMKVPLAKQ  180
TVTELPEEAG NLEERGIVEA AEVANVTEQT MVIEETVVAD VMEKTGITKE REVADVAVER  240
EMLEEKLVVD VTEETGVIDM VAKRGLPDDK MEVNLADQKG VLEETRVIEM IDKSEILEEK  300
LVANVSEQTG NLEDSNAVRD SGMDMAEVAK DIVMEEGSEK AEDTETGTVV ENVEKAERTE  360
AEMGDAAEGM EAAADTEMLD ITEEVETEAA EGTEDTEEVE DASKASGGKR KRGKSLNSKV  420
LARAPSRKKV EEDVCFICFD GGDLVLCDRR GCPKAYHTSC VGRDEAFFRA KGKWNCGWHL  480
CSNCKKNAYY MCYTCTFSLC KGCIKDAVIL CVRGNKGLCE SCMNLVMLIE RNEQAQVDFD  540
DKSSWEYLFK DYWIDLKGRL SITSDELAQS KNPWKGSEYR SAKKESPNEP YGFNDGGGSG  600
SDSSSGNAEV TVSKRRKTRS QTKSWKRGGD LPNTVTARGE GASTDESAEW ASKELLEVVM  660
HMRNGDKSVL SRMELSQLIL DYIQKHKLRD HQSKSYVICD LRLKNLFGKA RVGHIEMLNL  720
LDPHILFTKE DSQTDDLQGS VVDAEVNQLE ADWNSDAFTK TVKDKKRKTR KKGDARGLKS  780
NLDDYAAIDM HNINLIYLRR NLVEDLIEDT ETFHDKVVGS FVRLRISGAG QKQDLYRLVQ  840
VIGTSKVAEP YRVGKRTTDF LLEILNLNKT EVISIDIISN QEFTEDECKR LRQSIKCGLI  900
NRLTVADIQD KAMAIQAVRV KDWLESEIMR LSHLRDRASE KGRRKELREC VEKLQILKTP  960
EERQRRLEEI PVIHVDPNMD PSYESEEDEG EDDKRQDNFM RPRSGGFSRR GREPISPRKG  1020
GFNSSDSWSG TRNNSSMHRE LSRNLSNKGF TSKGDDSIGA SEIGNENLWN LGRERETQQP  1080
NSWDKPKTAS SLEIGTRNTR NIVVQEPSAK VVSEISAIPL SAGVTTAVQI NETEKIWHYQ  1140
DPSGKVQGPF SMVQLQKWSN TGYFPAELKI WRTNEKQDDS ILLTDALAGK FQKDSPVADN  1200
SFPNSQMAIY GNSLGATLKQ GMESQVGERS RFDQNHVAWS PQRSLGTSGQ SARGSWKSQT  1260
EVSSSTVGPA PSSLEIPRYS RDTWGSNTNL PSPTPNQNPT GGTKAQANES KQSPTPVQSS  1320
GSLTVANPFQ GGSTGLQPPI VVSESGSPAA PIVHSHMMVS GVSLQNLVQS VTAHNPSVDT  1380
HGWGSGSVSR QEAVAASSIP ATGNQAWRNA SAQKLEPNPS LAMLAQPAAY GHWNDTSQSG  1440
QNSAPFGTGN PAVVFPTPSQ PIMLPSDSWR PTVPVQSNHQ LPAPPNLPWG VAVADNQGAA  1500
LRQAPGYQNT GWGPMPGNQN MGWGAPLPAT TNVNWGASSQ GSASVNQNPS WAAPSQVPVP  1560
GNANSGWTAP GNAMQGWAPL GQGPAVVNAS SGWVAAGQGA AASGSANPGY VAPSGNSGMW  1620
GNEQNLNGDK FSNQTDRGSQ GGDSGFGGVK PWSRQSSFGS GGGSSRSPFK GQRVCKFHEN  1680
GHCKKGASCD YMHN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16485.10.0C3H family protein