PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022762795.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family TCP
Protein Properties Length: 549aa    MW: 57809.2 Da    PI: 7.4049
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022762795.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP131.86.5e-41168281489
             TCP   4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg......... 88 
                      k+ ++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++  ++s +ss+s+ s++         
  XP_022762795.1 168 VKRCTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSsLNVSLRSSGSTLSAPpsksaphsf 262
                     5889***************************************************************9997777777777744444444444444 PP

             TCP  89 ..................k 89 
                                       +
  XP_022762795.1 263 hnalalashhhhpyevgfS 281
                     4444444444444544432 PP

Sequence ? help Back to Top
Protein Sequence    Length: 549 aa     Download sequence    
MELTDLQSNK QTNNTNDNST EPHHQSIHHH HQQHHHHHFQ HQKQSSSPHF GVPFDGTRSS  60
APSSGHPFDM GSISHLHPHH HHHLLHPPSS TATTTTTSPL SSSSSSSSSS SISTTTTNPP  120
QLVDASLAIA TRSTSLNIDS TKKNEPNLPL SSTTTTTPTT TTTANPPVKR CTKDRHTKVD  180
GRGRRIRMPA TCAARVFQLT RELGHKSDGE TIEWLLQQAE PAIIAATGTG TIPANFSSLN  240
VSLRSSGSTL SAPPSKSAPH SFHNALALAS HHHHPYEVGF SHSALLGFHQ QQQQQQQHHL  300
LTADQIAEAL PGGGGGGGGD SGNSSENYMR KRFREDLFKD DNQQQGASGS GGGGGSGDGS  360
PIKAFKSGLS QLPKPQQDTG SSGLLRPSNI LPGTAMWAVA PAPSSGAGST FWMLPVTAGA  420
GGPSVATGAS GAGPSDQPQM WPFGTASPAS GNTLQAPLHF VPRFNLPGNV EFQGGRASPL  480
QLGSMLMQQQ PSQHLGLGMS ESNLGMLAAL NAYSRGGSNI NSEQNNPLEH PQHQLQGTDS  540
GDEDPNNSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58100.12e-66TCP family protein