PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022762795.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | TCP | ||||||||
Protein Properties | Length: 549aa MW: 57809.2 Da PI: 7.4049 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 131.8 | 6.5e-41 | 168 | 281 | 4 | 89 |
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg......... 88 k+ ++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++ ++s +ss+s+ s++ XP_022762795.1 168 VKRCTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSsLNVSLRSSGSTLSAPpsksaphsf 262 5889***************************************************************9997777777777744444444444444 PP TCP 89 ..................k 89 + XP_022762795.1 263 hnalalashhhhpyevgfS 281 4444444444444544432 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 549 aa Download sequence |
MELTDLQSNK QTNNTNDNST EPHHQSIHHH HQQHHHHHFQ HQKQSSSPHF GVPFDGTRSS 60 APSSGHPFDM GSISHLHPHH HHHLLHPPSS TATTTTTSPL SSSSSSSSSS SISTTTTNPP 120 QLVDASLAIA TRSTSLNIDS TKKNEPNLPL SSTTTTTPTT TTTANPPVKR CTKDRHTKVD 180 GRGRRIRMPA TCAARVFQLT RELGHKSDGE TIEWLLQQAE PAIIAATGTG TIPANFSSLN 240 VSLRSSGSTL SAPPSKSAPH SFHNALALAS HHHHPYEVGF SHSALLGFHQ QQQQQQQHHL 300 LTADQIAEAL PGGGGGGGGD SGNSSENYMR KRFREDLFKD DNQQQGASGS GGGGGSGDGS 360 PIKAFKSGLS QLPKPQQDTG SSGLLRPSNI LPGTAMWAVA PAPSSGAGST FWMLPVTAGA 420 GGPSVATGAS GAGPSDQPQM WPFGTASPAS GNTLQAPLHF VPRFNLPGNV EFQGGRASPL 480 QLGSMLMQQQ PSQHLGLGMS ESNLGMLAAL NAYSRGGSNI NSEQNNPLEH PQHQLQGTDS 540 GDEDPNNSQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58100.1 | 2e-66 | TCP family protein |