PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022762532.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 410aa MW: 45444.9 Da PI: 7.1882

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022762532.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.6	4.7e-05	52	74	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C+ C+k F r nL+ H r H XP_022762532.1 52 YICEVCHKGFQRDQNLQLHRRGH 74 89*******************88 PP
2	zf-C2H2	13.4	0.00023	128	150	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H + + XP_022762532.1 128 WKCDKCSKRYAVQSDWKAHTKIC 150 58*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MSNFVQEFEE DEQFQSTVIS QSSNESPNPL EHDPDAEVVA LSPRSLMATN RYICEVCHKG 60 FQRDQNLQLH RRGHNLPWKL KQRTNTQVKK RVYVCPEPNC VHHDPSRALG DLTGIKKHFC 120 RKHGEKKWKC DKCSKRYAVQ SDWKAHTKIC GTREYRCHCG TIFSRKDSFV THRAFCDALT 180 EENYKVNQNL APIGGILQRQ AQELFSSSMP CSDSCSNANT MMNLSISNEN MNNSLRPLCL 240 NLAGFMMPSN LDQNFNPRTS PASTLAIGSA YTSATALLQK AAEMGAKIGD NTIAPILLRS 300 FTGYSTSNMN SSGSVQEGCS MVGSNTATNA ASIDGFYMGE ETYDKNLESG DPRSHHTLDP 360 TALFDSHFLH SENGNASNLL GELYVEGGEK LTVDFLGVEP PGHQSAGKKL

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MSNFVQEFEE DEQFQSTVIS QSSNESPNPL EHDPDAEVVA LSPRSLMATN RYICEVCHKG  60
FQRDQNLQLH RRGHNLPWKL KQRTNTQVKK RVYVCPEPNC VHHDPSRALG DLTGIKKHFC  120
RKHGEKKWKC DKCSKRYAVQ SDWKAHTKIC GTREYRCHCG TIFSRKDSFV THRAFCDALT  180
EENYKVNQNL APIGGILQRQ AQELFSSSMP CSDSCSNANT MMNLSISNEN MNNSLRPLCL  240
NLAGFMMPSN LDQNFNPRTS PASTLAIGSA YTSATALLQK AAEMGAKIGD NTIAPILLRS  300
FTGYSTSNMN SSGSVQEGCS MVGSNTATNA ASIDGFYMGE ETYDKNLESG DPRSHHTLDP  360
TALFDSHFLH SENGNASNLL GELYVEGGEK LTVDFLGVEP PGHQSAGKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-101	C2H2 family protein