PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022762455.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | TCP | ||||||||
Protein Properties | Length: 261aa MW: 26824.1 Da PI: 10.5909 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 122.2 | 5.9e-38 | 29 | 121 | 3 | 95 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaa 95 +kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i ++tgt++++as+++ ++s+ ++ns+s +++s+ XP_022762455.1 29 VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIVAATGTGTTPASFSSVSASVRGGANSTSLPSMTSSS 121 79******************************************************************8884444444444333333333332 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MSNSEGGATN GAIMDPQRQQ APGNGSLVVK KPPSKDRHSK VDGRGRRIRM PIICAARVFQ 60 LTRELGHKSD GQTIEWLLRQ AEPSIVAATG TGTTPASFSS VSASVRGGAN STSLPSMTSS 120 SLDQKPLQGP TPFILGKRVR SDDDNAGKDD SGGVTVGPGV GSIVGPAGTH TGGFWAVPAR 180 SDFGQLWSFA PPPPPEMVVQ TAAVAAAAAQ QPAAALFVQQ QQAMGEASAA RVGNYLPSHL 240 NLLASLSGPP GSSGRRGEDP R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23280.1 | 2e-75 | TCP family protein |