PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022762235.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 323aa MW: 36529.8 Da PI: 6.3193

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022762235.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40	6.9e-13	146	193	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h ++Er+RR+++ ++f L ++P + kK++Ka++L A++Y+k+Lq XP_022762235.1 146 QDHIMAERKRREKLSQKFIALSAIVPGL-----KKMDKASVLGDAIKYLKQLQ 193 6799**********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MEISSIRELP ELGEEDPNLF NQHWHMNSLD ELSVLPLAAA FGENLQHSFS NYYPVAWNSC 60 KADADDISNL QAAFSPNTLS FASSNHMNSV GIWKPKEEAS CSKSMESFPS DFLFSQNPLI 120 GSQNYVLKGC HGAKRVSTGN RISQTQDHIM AERKRREKLS QKFIALSAIV PGLKKMDKAS 180 VLGDAIKYLK QLQEKVKTLE EQTRKKSMES VVFVKKSQLF DDNEDFSSDE NFSYPFDEPL 240 PEIEARFCDK SVLVRIHSEK RKGLSEKIMS EIEQCHLTII NSNVMTFGSS ALDITIVAQM 300 DMEFCMTVKD LVKKLRAVLK LLI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	152	157	ERKRRE
2	153	158	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	3e-58	bHLH family protein